Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02502 and BPUM_1404

See DNA alignment / Visit BSNT_02502 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_02502___ylbQ.1.24716.seq
#    -bsequence pep-align/BPUM_1404___ylbQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02502___ylbQ-BPUM_1404___ylbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02502___ylbQ-BPUM_1404___ylbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02502___ylbQ
# 2: BPUM_1404___ylbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     153/299 (51.2%)
# Similarity:   191/299 (63.9%)
# Gaps:           1/299 ( 0.3%)
# Score: 777.0
# 
#
#=======================================

BSNT_02502___      1 MKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQEQAAAIRSEGIRLYKGGE     50
                     |.|||||||::|||||.||:.||||||.|||.|||..||:.||.....||
BPUM_1404___y      1 MNIGIIGGGAIGLLCASYLTQYHDVTVFTRRNEQAEEIRAFGIERTVKGE     50

BSNT_02502___     51 EFRADCSADTSINSDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGM    100
                     ..:|...|.|.|..:||||:||||.|.||.|.|.|..:....||||||||
BPUM_1404___y     51 TCQASVHAQTGITGEFDLLIVTVKYHHLQDVLSELSTLSPHRILFLQNGM    100

BSNT_02502___    101 GHIHDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEP    150
                     .|:.||::|..|||:|:|:|||||::.||..|:|||:|.|||.||.....
BPUM_1404___y    101 AHLLDLENWKTGHSLYIGVVEHGAMKMSDHEVNHTGIGIIKWGAFQHEAA    150

BSNT_02502___    151 DRLNIMFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGEL    200
                     ..:..........|.:.|..:|.:||..||:||.||||||.||.|:||.|
BPUM_1404___y    151 ADIKKALNETSFHFQMVYMDEWKKLLQEKLLVNVCINPLTTLLHVRNGAL    200

BSNT_02502___    201 LTTPAYLAFMKLVFQEACSILKLENEEKAWERVQAVCGQTKENRSSMLVD    250
                     :..|:|...||..|:||.|||.|..:|:.|..|..||..|.||:||||.|
BPUM_1404___y    201 IQNPSYEYMMKCAFEEAVSILSLPEKERLWAYVNTVCENTAENQSSMLQD    250

BSNT_02502___    251 VIGGRQTEADAIIGYLLKEASLQGLDAVHLEFLYGSIKALERNTNKVF-    298
                     ::.|||||..||:|||||:|..||:...||.|...|::.||:...|.| 
BPUM_1404___y    251 IVKGRQTERKAILGYLLKKAQAQGVAVPHLTFFDRSLEVLEKKQTKSFE    299


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