Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02501 and BPUM_1403

See DNA alignment / Visit BSNT_02501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_02501___ylbP.1.24716.seq
#    -bsequence pep-align/BPUM_1403___ylbP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02501___ylbP-BPUM_1403___ylbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02501___ylbP-BPUM_1403___ylbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02501___ylbP
# 2: BPUM_1403___ylbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     122/160 (76.2%)
# Similarity:   139/160 (86.9%)
# Gaps:           1/160 ( 0.6%)
# Score: 646.0
# 
#
#=======================================

BSNT_02501___      1 MTKVERLLINYKTLEEFKKFKEYGIQELSMLEELQDNIIENDSTSPFYGI     50
                     |.:|:|||||||||||||:|||||||||||||:|:.|:|||||.||||||
BPUM_1403___y      1 MAQVKRLLINYKTLEEFKQFKEYGIQELSMLEDLESNMIENDSNSPFYGI     50

BSNT_02501___     51 YFGDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRAL    100
                     |||||||||||||||:|.:..||::..|||||||||||||||.:|||.||
BPUM_1403___y     51 YFGDKLVARMSLYQVDGSTTTYFNHNHDYLELWKLEVLPGYQRKGYGEAL    100

BSNT_02501___    101 VEFAKSFKMPIRTNPRMKSAEFWNKMNFKTVKYDMARDKGENPLIWHPDM    150
                     |||||||.:|||||||:|||.||:||.|::|||||.||||||||||.|..
BPUM_1403___y    101 VEFAKSFGLPIRTNPRVKSAGFWDKMGFESVKYDMERDKGENPLIWEPAH    150

BSNT_02501___    151 DHEMTPGESA    160
                     ..:.| ||||
BPUM_1403___y    151 IQKNT-GESA    159


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