Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02500 and BPUM_1402

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_02500___ylbO.1.24716.seq
#    -bsequence pep-align/BPUM_1402___gerR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02500___ylbO-BPUM_1402___gerR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02500___ylbO-BPUM_1402___gerR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: BPUM_1402___gerR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity:     111/193 (57.5%)
# Similarity:   142/193 (73.6%)
# Gaps:          14/193 ( 7.3%)
# Score: 569.5
# 
#
#=======================================

BSNT_02500___      1 MTITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACG     50
                     ||||||||||||||||||||||||||:||||||||||||:||:|||||||
BPUM_1402___g      1 MTITRQDAWTQDEDLLLAEVVLRHIRDGGTQLSAFEEVGKALSRTAAACG     50

BSNT_02500___     51 FRWNSYVRKQYQSGIELAKKQRKELRKQIGVHSVNMPNSMKQTASASSEG    100
                     ||||||||||||:||||||||||||||:||:||..:|.........:|..
BPUM_1402___g     51 FRWNSYVRKQYQAGIELAKKQRKELRKKIGIHSSGLPQHALTIEEKTSSN    100

BSNT_02500___    101 KRDLSIQDVIQFLEQFKEAPSAQEFQLEREKLKEQIQSLQKELEDLRSEN    150
                     :.:|::::|||||||.::.|...      ..|:|::...|.:|:.|..||
BPUM_1402___g    101 EAELTLREVIQFLEQLEKEPDGP------AHLREELADAQHQLKSLTEEN    144

BSNT_02500___    151 QTLRNQLEMTEEDYKALIDIMDRARKMVVSKEDGRMKKTAQET    193
                     :.|:.||:||||||:|||.|::|.::.:..||..:        
BPUM_1402___g    145 EHLKRQLKMTEEDYRALISIVERVKQNISLKEYAK--------    179


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