Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02500 and BPUM_1402
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_02500___ylbO.1.24716.seq
# -bsequence pep-align/BPUM_1402___gerR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02500___ylbO-BPUM_1402___gerR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02500___ylbO-BPUM_1402___gerR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: BPUM_1402___gerR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 111/193 (57.5%)
# Similarity: 142/193 (73.6%)
# Gaps: 14/193 ( 7.3%)
# Score: 569.5
#
#
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BSNT_02500___ 1 MTITRQDAWTQDEDLLLAEVVLRHIREGGTQLSAFEEVGRALTRTAAACG 50
||||||||||||||||||||||||||:||||||||||||:||:|||||||
BPUM_1402___g 1 MTITRQDAWTQDEDLLLAEVVLRHIRDGGTQLSAFEEVGKALSRTAAACG 50
BSNT_02500___ 51 FRWNSYVRKQYQSGIELAKKQRKELRKQIGVHSVNMPNSMKQTASASSEG 100
||||||||||||:||||||||||||||:||:||..:|.........:|..
BPUM_1402___g 51 FRWNSYVRKQYQAGIELAKKQRKELRKKIGIHSSGLPQHALTIEEKTSSN 100
BSNT_02500___ 101 KRDLSIQDVIQFLEQFKEAPSAQEFQLEREKLKEQIQSLQKELEDLRSEN 150
:.:|::::|||||||.::.|... ..|:|::...|.:|:.|..||
BPUM_1402___g 101 EAELTLREVIQFLEQLEKEPDGP------AHLREELADAQHQLKSLTEEN 144
BSNT_02500___ 151 QTLRNQLEMTEEDYKALIDIMDRARKMVVSKEDGRMKKTAQET 193
:.|:.||:||||||:|||.|::|.::.:..||..:
BPUM_1402___g 145 EHLKRQLKMTEEDYRALISIVERVKQNISLKEYAK-------- 179
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