Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02495 and BPUM_1398
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_02495___ylbL.1.24716.seq
# -bsequence pep-align/BPUM_1398___ylbL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02495___ylbL-BPUM_1398___ylbL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02495___ylbL-BPUM_1398___ylbL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02495___ylbL
# 2: BPUM_1398___ylbL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 239/343 (69.7%)
# Similarity: 288/343 (84.0%)
# Gaps: 3/343 ( 0.9%)
# Score: 1249.5
#
#
#=======================================
BSNT_02495___ 1 MLRKKHFSWM--LVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGY 48
::|.:..|: .|:::::..|:|:|||||:||||:|||:|..|:|:|||
BPUM_1398___y 1 -MKKLNIRWLSFFVVILVLCGLTFVKLPYYVTKPGDATEIAPHIQVDGGY 49
BSNT_02495___ 49 PEKGSLSLMTVKVGPANPFTYVWAKMHPYYEIVPDESIKEEGESDKEYMK 98
.||||.||||:|||||||:||:.|||:.|.||||:|:||.:||||::|||
BPUM_1398___y 50 GEKGSFSLMTIKVGPANPYTYLLAKMNKYDEIVPEENIKADGESDQDYMK 99
BSNT_02495___ 99 RQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVG 148
||||:||||||||:||||:||||||.|:|||:|||.|::.|||.||||||
BPUM_1398___y 100 RQLQLMKSSQENAMIAAYKKAGKKVDYTFNGVYASYVMKGMPAYGKIEVG 149
BSNT_02495___ 149 DKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQF 198
|:|.|.|||.|.||:|::.||||||||..|...:||..|:....:|||.|
BPUM_1398___y 150 DRIKSVDGKTYDSADKMVSYISSKKAGTPVRFVLERNGKDITEKVTLKPF 199
BSNT_02495___ 199 PDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMSLEIYNQLT 248
.:||:|.||||||:|||||||.|.|..:||||||||||||||||||||||
BPUM_1398___y 200 KEEPNRVGIGVSLFTDRNVKVSPSIKVDIENIGGPSAGLMMSLEIYNQLT 249
BSNT_02495___ 249 KPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNG 298
|.|||.||.||||||||.||.||||||||||||||||||||||||||..|
BPUM_1398___y 250 KEDETHGYAIAGTGTIDADGTVGPIGGIDQKVVAADKAGKDIFFAPNDKG 299
BSNT_02495___ 299 ASNSDYKNAVKTAKDIDSNMKIVPVDTMQDAIDYLNKLKAKST 341
..||||:|||||||||.|:||||||||||||::||||||.|::
BPUM_1398___y 300 DPNSDYRNAVKTAKDIKSDMKIVPVDTMQDALNYLNKLKEKAS 342
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