Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02495 and BPUM_1398
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence dna-align/BSNT_02495___ylbL.1.24716.seq
# -bsequence dna-align/BPUM_1398___ylbL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02495___ylbL-BPUM_1398___ylbL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02495___ylbL-BPUM_1398___ylbL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02495___ylbL
# 2: BPUM_1398___ylbL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity: 747/1074 (69.6%)
# Similarity: 747/1074 (69.6%)
# Gaps: 93/1074 ( 8.7%)
# Score: 2480.0
#
#
#=======================================
BSNT_02495___ 1 TTGCTACGTAAAAA--ACATTTTAGCTGGAT--GC-------TCGTCATC 39
|.|.||||| |.||.||.|||||.| || ||||.|||
BPUM_1398___y 1 -----ATGAAAAAATTAAATATTCGCTGGCTTAGCTTTTTTGTCGTGATC 45
BSNT_02495___ 40 CTCATACTGATCGCCGT--TTTATCATTTATAAAACTTCCATACTATATT 87
||..|| |.|| || .|||.|.|||.|.|||||.|||||.||..|.
BPUM_1398___y 46 CTTGTA-TTAT----GTGGCTTAACCTTTGTCAAACTGCCATATTACGTG 90
BSNT_02495___ 88 ACAAAACCGGGAGAAGCGACAGAGCTTGCT----TCATTGATAAAAGTGG 133
|||||.|||||.||.||.||.|||.||||| .|||| .||||.|
BPUM_1398___y 91 ACAAAGCCGGGTGATGCAACCGAGATTGCTCCCCACATT----CAAGTAG 136
BSNT_02495___ 134 AGGGAGGCTACCCGGAAAAAGGAAGCCTGTCCTTAATGACTGTTAAAGTG 183
|.||.||.||....||.||.||.|||.|.||..|.|||||..|||||||.
BPUM_1398___y 137 ACGGCGGATATGGCGAGAAGGGCAGCTTCTCTCTCATGACAATTAAAGTA 186
BSNT_02495___ 184 GGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTA 233
||.||.||||||||||.|||.|||.||...||.||.|||.|....|||.|
BPUM_1398___y 187 GGTCCAGCTAATCCGTATACGTATTTGCTTGCGAAAATGAATAAATATGA 236
BSNT_02495___ 234 TGAAATTGTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGG 283
.|||||.||.||.||.||.|..|||||.|.|||.||.|||||.|||.|.|
BPUM_1398___y 237 CGAAATCGTCCCAGAAGAAAATATTAAAGCGGACGGGGAGTCGGATCAAG 286
BSNT_02495___ 284 AGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTCGCAAGAAAATGCG 333
|.|||||||||||.|||||.||..||||||||||.||.||||||||||||
BPUM_1398___y 287 ATTATATGAAAAGGCAGCTTCAGCTGATGAAAAGTTCTCAAGAAAATGCG 336
BSNT_02495___ 334 GTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAG-CTATTCCTTTA 382
.|.||.||.||.|||.||||.|||||||||||||| || .|||.|.||||
BPUM_1398___y 337 ATGATTGCAGCATATAAAAAAGCAGGAAAAAAAGT-AGATTATACGTTTA 385
BSNT_02495___ 383 ACGGCATATACGCAAGCTCTGTTGTAGAAA--ACATGCCGGCAAAAGGGA 430
|||||.||||.|||||||.|| ||..|||| | |||||.||..|.||.|
BPUM_1398___y 386 ACGGCGTATATGCAAGCTATG-TGATGAAAGGA-ATGCCTGCCTACGGTA 433
BSNT_02495___ 431 AAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG 480
||||.|||||.||.||...|||||..||||.|||.|||||.|..|||.|.
BPUM_1398___y 434 AAATTGAAGTGGGCGACCGAATCAAAAGCGTAGATGGCAAGACGTATGAT 483
BSNT_02495___ 481 TCTGCTGAAAAGCTAATTGAT---TATATCAGCAGCAAAAAAGCGGGAGA 527
||||||||.|| |||.|.| |||||||||||||||||||| ||.
BPUM_1398___y 484 TCTGCTGATAA---AATGGTTTCGTATATCAGCAGCAAAAAAGC---AGG 527
BSNT_02495___ 528 TAAA---GTCACGTT---------AAAGATCGAAA--GAGAAGAAA---- 559
||.| ||| |||| || ||||| |..||||.|
BPUM_1398___y 528 TACACCTGTC-CGTTTTGTCCTTGAA----CGAAATGGCAAAGATATCAC 572
BSNT_02495___ 560 -AAGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGA 608
.||||| ||| ||.|||||||.||||...||.||||||.|
BPUM_1398___y 573 GGAGAAA---GTG--------ACATTAAAACCATTTAAAGAAGAGCCGAA 611
BSNT_02495___ 609 TCGGGCAGGAATCGGAGTTTCGCTTTATACAGACAGAAACGTGAAGGTAG 658
|||.|..|||||.||.||.||..|.|.|||||||.||||.|||||.||..
BPUM_1398___y 612 TCGAGTTGGAATTGGTGTATCATTATTTACAGACCGAAATGTGAAAGTTT 661
BSNT_02495___ 659 AGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGTCCGTCAGCAGGG 708
..|||..||||.|..|.||.|||||||||||.|||||.||.||||||||.
BPUM_1398___y 662 CACCTTCTATTAAGGTGGATATTGAAAATATCGGCGGCCCATCAGCAGGT 711
BSNT_02495___ 709 TTAATGATGTCCCTTGAAATCTATAATCAGCTGACAAAACCAGACGAAAC 758
.|.||||||||.||||||||.|||||.||||||||||||..|||||||||
BPUM_1398___y 712 CTTATGATGTCACTTGAAATTTATAACCAGCTGACAAAAGAAGACGAAAC 761
BSNT_02495___ 759 AAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGATGGGAAAG 808
|.|.|||||.|..|||||.|||||.||.||.|||||.|..|||||.|..|
BPUM_1398___y 762 ACATGGCTATGCGATTGCAGGAACGGGAACGATTGACGCCGATGGAACGG 811
BSNT_02495___ 809 TAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCC 858
|.|||||.||.|||||.||.||||||||.|||||.||.|||||.||||||
BPUM_1398___y 812 TCGGCCCAATTGGCGGAATCGATCAAAAGGTCGTGGCGGCAGATAAAGCC 861
BSNT_02495___ 859 GGAAAAGACATTTTCTTCGCGCCAAATCAAAACGGCG--CCAGCAATTCC 906
||.|||||.||.|||||.||.||.||..|.||.||.| ||| |||||.
BPUM_1398___y 862 GGCAAAGATATATTCTTTGCACCGAACGATAAAGGTGATCCA--AATTCA 909
BSNT_02495___ 907 GATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAA---ATAT 953
||.||....||.||.||.||||||||.|||||||||.| || ||||
BPUM_1398___y 910 GACTACCGAAATGCTGTCAAAACAGCGAAAGATATTAA---AAGTGATAT 956
BSNT_02495___ 954 GAAGATTGTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATA 1003
|||.|||||.|||||.|||||.|||||.|||||..|..|.|||||.||||
BPUM_1398___y 957 GAAAATTGTACCTGTAGATACAATGCAAGATGCTCTGAACTATTTAAATA 1006
BSNT_02495___ 1004 AGCTGAAAGCGAAAAGCACCTGA- 1026
|..|.||||.| ||||||.||.|
BPUM_1398___y 1007 AATTAAAAGAG-AAAGCATCTTAA 1029
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