Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02493 and BPUM_1396
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_02493___ylbJ.1.24716.seq
# -bsequence pep-align/BPUM_1396___ylbJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02493___ylbJ-BPUM_1396___ylbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02493___ylbJ-BPUM_1396___ylbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02493___ylbJ
# 2: BPUM_1396___ylbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 267/411 (65.0%)
# Similarity: 324/411 (78.8%)
# Gaps: 12/411 ( 2.9%)
# Score: 1343.5
#
#
#=======================================
BSNT_02493___ 1 MNLSKINTLLIASFFLFLTATVISHPQASFEASKTGLSMWWEVVFPSLLP 50
:.|.|||.||:||:|||||||:|||||.:|||.||:||||||||||||
BPUM_1396___y 1 --MKKWNTLFIAAFFIFLTATVITHPQASLQASKNGLAMWWEVVFPSLLP 48
BSNT_02493___ 51 FFILSELLIGFGIVRFVGVLLEPFMRPIFRVPGVGGFVLAMGMASGNPAG 100
|||||||||.||||||||||||||||||||||||||||||||||||.|:|
BPUM_1396___y 49 FFILSELLISFGIVRFVGVLLEPFMRPIFRVPGVGGFVLAMGMASGFPSG 98
BSNT_02493___ 101 AKLTARLRQENQISRVEAERLASFTNSSNPLFIFGAVAVGFFQNASLGIL 150
||||.|||||.|::::|||||.||||||||||||||||||||.:.:|||:
BPUM_1396___y 99 AKLTTRLRQEGQLTQIEAERLVSFTNSSNPLFIFGAVAVGFFHHPALGIV 148
BSNT_02493___ 151 LASAHYLGNLAVGLTMRSYGRKEEQQLRRKKTIPFPSVKDALHALHTARL 200
||.||||||||||:|||.|..:.:..||.:|.:.||..::|..|||||||
BPUM_1396___y 149 LACAHYLGNLAVGVTMRGYKARHDAHLRSRKRLLFPPFQEAFSALHTARL 198
BSNT_02493___ 201 AEKRPLGKILGDAVTSSVQTLLMVGGFIILFSVFNRLLSVVQLTDVLSVF 250
|||||||:||.|||.||||||.|:||||||||||:::||||.:||:|||.
BPUM_1396___y 199 AEKRPLGQILSDAVMSSVQTLFMIGGFIILFSVFSKMLSVVHVTDLLSVG 248
BSNT_02493___ 251 TKGALTLFQLPTQLDIPLLSGMFEITLGSKLVSETDVSLLQKAIIVSFIL 300
....|....||.:||:.:::|:|||||||:|....:|:||.|.::|||||
BPUM_1396___y 249 IGYMLQTMHLPPELDLAMIAGLFEITLGSQLTGSQEVTLLAKTVVVSFIL 298
BSNT_02493___ 301 GFSGFSVQAQVAGILSETDIRFKPFFIARLLQGVYAAVFVMLLWKPLYTA 350
|||||||||||||||:.|||||||||.||||.|:|||:|..||:||||.:
BPUM_1396___y 299 GFSGFSVQAQVAGILAATDIRFKPFFFARLLHGIYAAIFAFLLFKPLYVS 348
BSNT_02493___ 351 WHD---PYQYVFKSLNSSDMPTAFINGWNLLVQIGPAVTLCALFTYIIIF 397
..| | ...|::.....|.::.: ||.||..||.:|||:|..|::::
BPUM_1396___y 349 RSDMALP-AGAFEASQQVVMYSSVL--WNQLVTTGPLITLCSLILYMVLY 395
BSNT_02493___ 398 SYRLTNGTKKG 408
..::..|
BPUM_1396___y 396 YQKVKKG---- 402
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