Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02492 and BPUM_1395

See DNA alignment / Visit BSNT_02492 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_02492___coaD.1.24716.seq
#    -bsequence pep-align/BPUM_1395___coaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02492___coaD-BPUM_1395___coaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02492___coaD-BPUM_1395___coaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02492___coaD
# 2: BPUM_1395___coaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     124/161 (77.0%)
# Similarity:   143/161 (88.8%)
# Gaps:           1/161 ( 0.6%)
# Score: 647.0
# 
#
#=======================================

BSNT_02492___      1 MASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEE     50
                     |.:||||||||||||.||||||||||.||::|||||||||||||||:|||
BPUM_1395___c      1 MGNIAVCPGSFDPVTLGHLDIIKRGAKIFDEVYVCVLNNSSKKPLFTVEE     50

BSNT_02492___     51 RCELLREVTKDIPNITVETSQGLLIDYAKRKNAKAILRGLRAVSDFEYEM    100
                     ||||:|:.|||:|||.||:..|||:||||:|.||.||||||||:||||||
BPUM_1395___c     51 RCELIRQATKDLPNIKVESFHGLLVDYAKQKEAKVILRGLRAVTDFEYEM    100

BSNT_02492___    101 QGTSVNRVLDESIETFFMMTNNQYSFLSSSIVKEVARYNGSVSEFVPPEV    150
                     ||||:|:||::.||||||||||||||||||||||||:|:|||...||.||
BPUM_1395___c    101 QGTSMNKVLNDDIETFFMMTNNQYSFLSSSIVKEVAKYDGSVKGLVPKEV    150

BSNT_02492___    151 ELALQQKFRQG    161
                     |.||.:||:. 
BPUM_1395___c    151 EEALIEKFKG-    160


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.