Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02491 and BPUM_1394
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_02491___ylbH.1.24716.seq
# -bsequence pep-align/BPUM_1394___ylbH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02491___ylbH-BPUM_1394___ylbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02491___ylbH-BPUM_1394___ylbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02491___ylbH
# 2: BPUM_1394___ylbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 102/185 (55.1%)
# Similarity: 124/185 (67.0%)
# Gaps: 35/185 (18.9%)
# Score: 553.0
#
#
#=======================================
BSNT_02491___ 1 ----------------------------------MIGPYFDGGMGLDLFA 16
|||||||||..|||||
BPUM_1394___y 1 MRVISGTRKGRTLKAVPGQSTRPTTDKVKESIFNMIGPYFDGGWALDLFA 50
BSNT_02491___ 17 GSGGLGIEALSRGFEHCIFVDRDFKAIQTVKSNLKTLELTKHAQVYRNDA 66
||||||||||||||:||||||||.|||||:|.||..|||:..::|:||:|
BPUM_1394___y 51 GSGGLGIEALSRGFDHCIFVDRDMKAIQTIKGNLNQLELSDQSEVFRNEA 100
BSNT_02491___ 67 ERALHAAAKRETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAE 116
:|||.|..|||..|:.||||||||:|:|||||.:|||:.:|.:||.||.|
BPUM_1394___y 101 KRALAAVVKREESFQAIFLDPPYKDQQLKALLDMIDEHALLTDDGVIVCE 150
BSNT_02491___ 117 HDREVELPETVGDLVMTRKETYGLTGVAIYKKRG- 150
||::|.|||..|.|.::|:|.|||||:.||:|||
BPUM_1394___y 151 HDKDVTLPEEAGQLYISRQELYGLTGITIYRKRGN 185
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