Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02487 and BPUM_1392

See DNA alignment / Visit BSNT_02487 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02487___ylbF.1.24716.seq
#    -bsequence pep-align/BPUM_1392___ylbF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02487___ylbF-BPUM_1392___ylbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02487___ylbF-BPUM_1392___ylbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02487___ylbF
# 2: BPUM_1392___ylbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     116/149 (77.9%)
# Similarity:   133/149 (89.3%)
# Gaps:           0/149 ( 0.0%)
# Score: 630.0
# 
#
#=======================================

BSNT_02487___      1 MYATMESVRLQSEAQQLAEMILQSETAENYRNCYKRLQEDEEAGRIIRSF     50
                     ||||:|||.||.||.|||.||||||.||:||||:||||:||||.:||..|
BPUM_1392___y      1 MYATIESVELQEEANQLAAMILQSEEAEHYRNCFKRLQQDEEAQQIIAHF     50

BSNT_02487___     51 IKIKEQYEDVQRFGKYHPDYREISRKMREIKRELDLNDKVADFKRAENEL    100
                     .|:||||||||||||||||||.||::|||:||:|||:|.|.|||:||..:
BPUM_1392___y     51 TKVKEQYEDVQRFGKYHPDYRTISKEMREVKRKLDLHDTVVDFKKAETAI    100

BSNT_02487___    101 QSILDEVSVEIGTAVSEHVKVPTGNPYFDGLSSCGGGCGSGGSCGCKVS    149
                     ||||||:|:|||.|||.::||||||||||||||||||||||||||||||
BPUM_1392___y    101 QSILDEISIEIGQAVSAYIKVPTGNPYFDGLSSCGGGCGSGGSCGCKVS    149


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.