Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02487 and BPUM_1392

See Amino acid alignment / Visit BSNT_02487 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_02487___ylbF.1.24716.seq
#    -bsequence dna-align/BPUM_1392___ylbF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02487___ylbF-BPUM_1392___ylbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02487___ylbF-BPUM_1392___ylbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02487___ylbF
# 2: BPUM_1392___ylbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity:     342/460 (74.3%)
# Similarity:   342/460 (74.3%)
# Gaps:          20/460 ( 4.3%)
# Score: 1184.5
# 
#
#=======================================

BSNT_02487___      1 ATGTATGCGACGATGGAATCCGTGCGGCTTCAA-AGTGAAGCTCAGCA--     47
                     |||||||||||.||.|||||||||..|||.||| || |||||..|.||  
BPUM_1392___y      1 ATGTATGCGACAATCGAATCCGTGGAGCTCCAAGAG-GAAGCAAATCAAT     49

BSNT_02487___     48 --GCTTGCCGAGATGATTCTGCAGTCGGAGACGGCTGAGAACTACCGCAA     95
                       || ||||   ||||||||.|||||||||..||||||..|.||||||||
BPUM_1392___y     50 TGGC-TGCC---ATGATTCTTCAGTCGGAGGAGGCTGAACATTACCGCAA     95

BSNT_02487___     96 TTGTTACAAGCGTCTCCAGGAAGATGAAGAGGCAGGTCGGATTATTCGTT    145
                     .||.|..||||||||||||.||||.|||||.||....|..|||||| |..
BPUM_1392___y     96 CTGCTTTAAGCGTCTCCAGCAAGACGAAGAAGCCCAACAAATTATT-GCC    144

BSNT_02487___    146 C-TTTTATCAAAA-TAAAAGAGCAGTATGAGGATGTACAGCGTTTTGGCA    193
                     | ||||| ||||| ||||||||||.|||||||||||.|||||.||.||||
BPUM_1392___y    145 CATTTTA-CAAAAGTAAAAGAGCAATATGAGGATGTGCAGCGGTTCGGCA    193

BSNT_02487___    194 AATATCATCCTGACTATAGAGAAATATCCCGGAAAATGAGGGAGATCAAA    243
                     ||||.|||||.|||||||||...||.||...|.|||||.|.|||.|||||
BPUM_1392___y    194 AATACCATCCGGACTATAGAACGATCTCAAAGGAAATGCGTGAGGTCAAA    243

BSNT_02487___    244 CGTGAGCTGGACCTGAACGACAAGGTGGCTGACTTCAAGAGAGCTGAAAA    293
                     .|..||.|.||.||..||||.|..||||.|||.|||||.|.|||.||||.
BPUM_1392___y    244 AGAAAGTTAGATCTTCACGATACAGTGGTTGATTTCAAAAAAGCAGAAAC    293

BSNT_02487___    294 TGAGCTCCAGTCCATTCTT-GATGAGGTCAGCGTTGAGATTGGGACAGCT    342
                     .|.|.|.||.|||| |||| ||||||.|.||..||||.||.||...||||
BPUM_1392___y    294 AGCGATTCAATCCA-TCTTAGATGAGATTAGTATTGAAATCGGTCAAGCT    342

BSNT_02487___    343 GTTTCGGAGC--ATGTGAAAGTTCCGACTGGGAACCCTTATTTTGACGGT    390
                     ||.||  |||  ||.|.||||||||.||.||||||||.||||||||.|||
BPUM_1392___y    343 GTATC--AGCATATATCAAAGTTCCAACAGGGAACCCATATTTTGATGGT    390

BSNT_02487___    391 TTGTCTTCATGCGGAGGCGGCTGCGGTTCAGGCGGAAGCTGCGGATGTAA    440
                     .|.||.||||||||.||.|||||.||.||.||.||.|||||.||.|||||
BPUM_1392___y    391 CTATCATCATGCGGCGGTGGCTGTGGATCTGGTGGCAGCTGTGGCTGTAA    440

BSNT_02487___    441 AGTGTCCTGA    450
                     |||.||.|||
BPUM_1392___y    441 AGTATCTTGA    450


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