Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02484 and BPUM_1389

See DNA alignment / Visit BSNT_02484 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02484___ylbD.1.24716.seq
#    -bsequence pep-align/BPUM_1389___ylbD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02484___ylbD-BPUM_1389___ylbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02484___ylbD-BPUM_1389___ylbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02484___ylbD
# 2: BPUM_1389___ylbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      82/137 (59.9%)
# Similarity:   101/137 (73.7%)
# Gaps:           5/137 ( 3.6%)
# Score: 436.0
# 
#
#=======================================

BSNT_02484___      1 MANQHANHSINDFKQFVKKHPKLIKEVRKEQRSWQDVYENWVLFGESDPI     50
                     |.|:....||::|||||::|||||:||:.:::|||.||||||:|||.|.:
BPUM_1389___y      1 MTNKQKQTSIDEFKQFVRRHPKLIQEVQTQEKSWQSVYENWVMFGEEDEM     50

BSNT_02484___     51 WDPYREPE-----EASEAVPETPQKNDFVSKMVTAVKKMDVNQMNEQINK     95
                     |.|||:.:     |...:.|....|.||:||||:||||||.:||||||||
BPUM_1389___y     51 WSPYRQTQSEDVKEEKASKPSESGKADFMSKMVSAVKKMDADQMNEQINK    100

BSNT_02484___     96 MSQSISSLQSLLNTFSGSGQKHSQPGSGQHPFSFRKD    132
                     ||||||||||||..||.:|.|....|..|||||||||
BPUM_1389___y    101 MSQSISSLQSLLGQFSSNGSKKGSSGGSQHPFSFRKD    137


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