Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02482 and BPUM_1387

See DNA alignment / Visit BSNT_02482 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02482___ylbB.1.24716.seq
#    -bsequence pep-align/BPUM_1387___ylbB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02482___ylbB-BPUM_1387___ylbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02482___ylbB-BPUM_1387___ylbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02482___ylbB
# 2: BPUM_1387___ylbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      84/149 (56.4%)
# Similarity:   111/149 (74.5%)
# Gaps:          10/149 ( 6.7%)
# Score: 411.5
# 
#
#=======================================

BSNT_02482___      1 MTKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIV     50
                            ||..:..|...||.|||||||:||::||||||  :|:.|||||
BPUM_1387___y      1 -------MTKKVVTCQQDDNSYEAAVKMRDADIGAIPVV--NGDQLVGIV     41

BSNT_02482___     51 TDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLR    100
                     |||||||||||.||||||::...||::.::.||||:::|::.||:.||||
BPUM_1387___y     42 TDRDLVLRGIAEKKPNSQEVGSIMTKEVLTAEEDATLEEIVRLMSEHQLR     91

BSNT_02482___    101 RIPVTKNKKLTGIVTLGDLSLSEQTNERAGSALSDISEGD-NREEGFFH    148
                     ||||.||..|||||.|||||:.:.:|:|||.||::||:.| :..:||.|
BPUM_1387___y     92 RIPVVKNGALTGIVALGDLSVEDLSNDRAGDALTEISQQDQDHGQGFLH    140


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