Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02481 and BPUM_1386

See DNA alignment / Visit BSNT_02481 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02481___ylbA.1.24716.seq
#    -bsequence pep-align/BPUM_1386___ylbA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02481___ylbA-BPUM_1386___ylbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02481___ylbA-BPUM_1386___ylbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: BPUM_1386___ylbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      69/122 (56.6%)
# Similarity:    91/122 (74.6%)
# Gaps:           3/122 ( 2.5%)
# Score: 381.0
# 
#
#=======================================

BSNT_02481___      1 MLKFTESGLEGVKAELSWLDDLMESKGLIRAGQWDYERVTYDKKFSTIEG     50
                      :||..:|:|.|.|:|:.||.:|||:|.:||.||||||||||:|::.:||
BPUM_1386___y      1 -MKFEGTGIEKVAADLNKLDFIMESEGFVRADQWDYERVTYDRKYNMVEG     49

BSNT_02481___     51 TFYLRIQGIAAEGDVGSGRAVIQLMSPLLGKHYYPHGVEYGETEEFPVQV    100
                     ||||||.|.|.||||||.||.|||::||||||||||||||||.|:||..:
BPUM_1386___y     50 TFYLRISGYATEGDVGSKRAHIQLLTPLLGKHYYPHGVEYGEGEDFPKSL     99

BSNT_02481___    101 VTKSKALIQDISDMLKTVQM--    120
                     :..||..:..:.:.|:.:..  
BPUM_1386___y    100 IQSSKKTLDQLKEKLEAMTAEA    121


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