Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02479 and BPUM_1385

See DNA alignment / Visit BSNT_02479 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02479___ctaG.1.24716.seq
#    -bsequence pep-align/BPUM_1385___ctaG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02479___ctaG-BPUM_1385___ctaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02479___ctaG-BPUM_1385___ctaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02479___ctaG
# 2: BPUM_1385___ctaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     180/300 (60.0%)
# Similarity:   227/300 (75.7%)
# Gaps:          11/300 ( 3.7%)
# Score: 978.0
# 
#
#=======================================

BSNT_02479___      1 MNQLEIFGFRAMWSPYLFCILLGITALYLYFYRRMSSKPNRITGKEMVCF     50
                     |..||||||||:||||....::...||||..   ::...:|.|.||...|
BPUM_1385___c      1 MENLEIFGFRALWSPYYLTSIVIAAALYLLL---VTKGKHRATVKEKTLF     47

BSNT_02479___     51 LSAMLFLYAAEGSPVDLLGHIMFSAHMVQMAVLYLVVPPLLIAGIPAWLW    100
                     |:.::.|||.:|||:||:|||||||||.||||||||:|||||.|:||.:|
BPUM_1385___c     48 LTGLVLLYAVKGSPIDLMGHIMFSAHMAQMAVLYLVIPPLLITGLPAAIW     97

BSNT_02479___    101 EKIIFRPSIKPVFSFFTTPLIALLLFNGIFSLYHVPLIFDTVKTDSFYHT    150
                     |:||..|.|:.:|..|:.||||||.|||:||:||:||:||.||||.|||.
BPUM_1385___c     98 ERIIQTPGIQQMFRLFSKPLIALLGFNGLFSMYHIPLVFDFVKTDPFYHA    147

BSNT_02479___    151 FITWLIFVLAFFMWWPLVHKVGRLRQLSGLMKLGYIMADGMLLTPACALI    200
                     .:|.:||:.||||||||||||....|::|::|||||||||:|:|||||||
BPUM_1385___c    148 LMTVVIFIAAFFMWWPLVHKVQSQPQITGILKLGYIMADGILMTPACALI    197

BSNT_02479___    201 MFSGAPLYATYTDPSAWAEAMRLCVPADMMGQVPLTGPEMLNTLPLLEDQ    250
                     |||.||:||||:|..||.:|:.||||:|.:..:.||||||.:||||||||
BPUM_1385___c    198 MFSEAPIYATYSDAGAWIQALHLCVPSDTLAGLALTGPEMFHTLPLLEDQ    247

BSNT_02479___    251 QLGAVMMKIIQEIVYGTFLAIIFFQWVKKEREKDGQEE---PPYIQQTIS    297
                     ||||::||||||||||:.||::||.|.:|||.||...:   |.|.     
BPUM_1385___c    248 QLGAILMKIIQEIVYGSILAVVFFDWARKERAKDAVPDALIPKYE-----    292


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