Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02470 and BPUM_1379

See DNA alignment / Visit BSNT_02470 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence pep-align/BSNT_02470___ctaA.1.24716.seq
#    -bsequence pep-align/BPUM_1379___ctaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02470___ctaA-BPUM_1379___ctaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02470___ctaA-BPUM_1379___ctaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02470___ctaA
# 2: BPUM_1379___ctaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     226/308 (73.4%)
# Similarity:   262/308 (85.1%)
# Gaps:           3/308 ( 1.0%)
# Score: 1189.0
# 
#
#=======================================

BSNT_02470___      1 MNKALKALGVLTTFVMLIVLIGGALVTKTGSGQGCGRQWPLCHGRFFPEL     50
                     |..||:.|.|:|||||||||||||||||||||.||||||||||||||||:
BPUM_1379___c      1 MKFALRLLSVITTFVMLIVLIGGALVTKTGSGLGCGRQWPLCHGRFFPEM     50

BSNT_02470___     51 NPASIIEWSHRFASGISIILVLSLAFWSWRKITPIFRETTFLAIMSIIFL    100
                     |||||||||||.::|:|.||||:||...|:||:|:||||.||.|||||||
BPUM_1379___c     51 NPASIIEWSHRMSTGVSTILVLALAVLCWKKISPVFRETKFLVIMSIIFL    100

BSNT_02470___    101 FLQALLGALAVVFGSNALIMALHFGISLISFASVLILTLLIFEADKSVRT    150
                     .|||||||||||||||||:||||||||||||||||:|.||:|||.:|...
BPUM_1379___c    101 LLQALLGALAVVFGSNALVMALHFGISLISFASVLLLALLVFEATRSETK    150

BSNT_02470___    151 LVKPLQIGKKMQFHMIGILIYSYIVVYTGAYVRHTESSLACPDVPLCSPL    200
                     |||||.||||||||:.|::.|:|||||||||||||:|||||...|.||. 
BPUM_1379___c    151 LVKPLHIGKKMQFHIYGLITYTYIVVYTGAYVRHTKSSLACSVFPFCSK-    199

BSNT_02470___    201 NNGLPTQFHEWVQMGHRAAALLLFVWIIVAAVHAITSYKDQKQIFWGWIS    250
                     :..||..|::||||.||||||||||||.||..||:..||:|||:::|||.
BPUM_1379___c    200 DGALPAYFNQWVQMSHRAAALLLFVWIFVAMFHAMKHYKEQKQLYYGWII    249

BSNT_02470___    251 CLIFITLQALSGIMIVYTELALGFALAHSFFIACLFGVLCYFLLLIARFR    300
                     ..|.|||||:||:|.||::||||:||||||||:|||||||||.||||||:
BPUM_1379___c    250 SAILITLQAISGVMSVYSQLALGYALAHSFFISCLFGVLCYFCLLIARFK    299

BSNT_02470___    301 YESRQS--    306
                     |||::.  
BPUM_1379___c    300 YESKEPFK    307


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.