Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02468 and BPUM_1376
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence pep-align/BSNT_02468.1.24716.seq
# -bsequence pep-align/BPUM_1376___ftsW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02468-BPUM_1376___ftsW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02468-BPUM_1376___ftsW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02468
# 2: BPUM_1376___ftsW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 227/403 (56.3%)
# Similarity: 284/403 (70.5%)
# Gaps: 48/403 (11.9%)
# Score: 1205.0
#
#
#=======================================
BSNT_02468 1 ------------------------------------------------MR 2
.:
BPUM_1376___f 1 MLKRMLKSYDYSLLFAIILISAFGLVMVYSSSMITSVIRYEAAPDNFFKK 50
BSNT_02468 3 QLFALIAGGALFILMALFPYKALAHQKFQKGILLVSVLALISLFVFGHVA 52
||..:|.|..:.:..||.||:..:::|||.|:||:||.:||.::..||:|
BPUM_1376___f 51 QLLFMIVGAVILLFTALVPYQLFSNKKFQIGMLLLSVFSLIYVYFGGHIA 100
BSNT_02468 53 GNAQSWFKIGGMSIQPGEFVKLVVILYLAAVYAKKQSYIDHLLTGVAPPV 102
|||:||.|:|..|:||.||||:|||:||||||||||.||||:|.||.||:
BPUM_1376___f 101 GNARSWIKVGPFSLQPAEFVKIVVIIYLAAVYAKKQHYIDHILRGVTPPI 150
BSNT_02468 103 VMTLIICGLIAMQPDFGTAMIIGLIATCMILCSGFSGKTLVRLLLLGGIV 152
|:..|:||.|.:|||:|||.|||:||..||||||||||||.:||.|...|
BPUM_1376___f 151 VIVSILCGFIILQPDYGTAFIIGMIALAMILCSGFSGKTLAKLLALFSAV 200
BSNT_02468 153 FILVSPILYLNQDQILTKGRLARFESLEDPFKYANSSGLQVVNSYYAISS 202
.::|:|.:.|..|:|.|:.||.||||.:||||.|.::|.|::||||||.|
BPUM_1376___f 201 MVVVTPFIILFWDKIFTQNRLGRFESFQDPFKDAGATGHQLINSYYAIGS 250
BSNT_02468 203 GGIFGLGLGESIQKYGYLPESHTDFIMAVIAEELGIFGVLFVIFLLGFVV 252
||.||||||||:||||||||.|||||||:|:||||.|||.||:.||||:|
BPUM_1376___f 251 GGFFGLGLGESVQKYGYLPEPHTDFIMAIISEELGFFGVFFVLALLGFIV 300
BSNT_02468 253 IKGFYIARKCEDPFGSLLAIGISSMIAVQSFINLGGVSGLIPITGVTLPF 302
:||||||||||||||||||||||||||:|:.|||||||||||||||||||
BPUM_1376___f 301 VKGFYIARKCEDPFGSLLAIGISSMIAIQTCINLGGVSGLIPITGVTLPF 350
BSNT_02468 303 ISYGGSSLVLLLASMGILANISMFVKYSENKKKREPLAPKGMKKKQLKKT 352
|||||||::||...||||.|||||.:|.|..||::.:....::|..::||
BPUM_1376___f 351 ISYGGSSIILLSGCMGILLNISMFTEYKERYKKKKSMNKPSVQKNGMQKT 400
BSNT_02468 353 VYL 355
:.|
BPUM_1376___f 401 LNL 403
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