Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02468 and BPUM_1376
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_02468.1.24716.seq
# -bsequence dna-align/BPUM_1376___ftsW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02468-BPUM_1376___ftsW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02468-BPUM_1376___ftsW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02468
# 2: BPUM_1376___ftsW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1293
# Identity: 750/1293 (58.0%)
# Similarity: 750/1293 (58.0%)
# Gaps: 306/1293 (23.7%)
# Score: 2245.5
#
#
#=======================================
BSNT_02468 0 -------------------------------------------------- 0
BPUM_1376___f 1 ATGTTAAAGAGAATGCTAAAATCGTATGACTACTCATTATTGTTCGCCAT 50
BSNT_02468 0 -------------------------------------------------- 0
BPUM_1376___f 51 TATTTTAATTAGCGCATTCGGTTTGGTCATGGTGTATAGCTCAAGTATGA 100
BSNT_02468 1 ------------------------ATGCGGCAGCTGTTTGCTTTAA---- 22
.||||.|||.|..||..|||||
BPUM_1376___f 101 TTACATCTGTGATTAGATACGAGGCTGCGCCAGATAATTTTTTTAAGAAA 150
BSNT_02468 23 -----TTGCGGGTGGCGCTCTATTTATTCTCATGGCGTTG---------- 57
|| |||||||..| |||||
BPUM_1376___f 151 CAGCTTT-------------TATTTATGAT-----CGTTGGAGCGGTCAT 182
BSNT_02468 58 TTTCCT-TATAAAGCACT-GGCCCA------------TCAA-----AAGT 88
|||.|| |.||.|||||| |..||| |||| ||.|
BPUM_1376___f 183 TTTGCTCTTTACAGCACTCGTTCCATATCAGTTGTTTTCAAATAAGAAAT 232
BSNT_02468 89 TTCAGAAGGGGATACTGCTTGTATCTGTTCTCGCGCTTATCTCACTGTTT 138
||||.|..||.||.|||||..||||.|||.|..|.||.|||| .|||.|
BPUM_1376___f 233 TTCAAATCGGTATGCTGCTGCTATCCGTTTTTTCCCTCATCT--ATGTGT 280
BSNT_02468 139 GTTTT--CGGGCATGTTGCCGGAAACGCGCAG-AGCTGGTTTAAAATCGG 185
..||| |||.|||.||||.||.||||| .|| ||||||.|||||.|.||
BPUM_1376___f 281 ACTTTGGCGGTCATATTGCAGGGAACGC-AAGAAGCTGGATTAAAGTAGG 329
BSNT_02468 186 CGGAATGAGTATTCAGCCGGGGGAGTTTGTGAAACTGGTCGTGATTTTAT 235
...|.|.|||.|||||||.|.|||.||||||||..|.||.||.|||.|.|
BPUM_1376___f 330 TCCATTCAGTCTTCAGCCAGCGGAATTTGTGAAGATTGTTGTCATTATTT 379
BSNT_02468 236 ACCTTGCAGCCGTATATGCAAAAAAACAAAGTTATATCGACCATCTGTTA 285
|.|||||.||.||.|||||||||||.||...||||||.||.|||.| ||.
BPUM_1376___f 380 ATCTTGCTGCTGTGTATGCAAAAAAGCAGCATTATATTGATCATAT-TTT 428
BSNT_02468 286 ACG-GGAGTAGCCCCTCCGGTAGTCATGA------CG--CTTATAATTTG 326
||| |||||..|.||||| |.||.||| || |||| ||
BPUM_1376___f 429 ACGAGGAGTCACACCTCC---AATCGTGATTGTCTCGATCTTA-----TG 470
BSNT_02468 327 CGGGTTAATTGCCA---TGCAGCCAGATTTCGGTACAGCCATGATTATAG 373
|||.||.|| || ||||||||||.|..||.|||||..|.||.||.|
BPUM_1376___f 471 CGGATTTAT---CATTTTGCAGCCAGACTATGGGACAGCTTTTATCATTG 517
BSNT_02468 374 GGTTAATTGCGACGTGC-ATGATCTTGTGCTCCGGCTTCAGCGGAAAGAC 422
|..|.|||||| |.||| |||||.||.||.||.||.||.|||||.||.||
BPUM_1376___f 518 GCATGATTGCG-CTTGCGATGATTTTATGTTCAGGGTTTAGCGGGAAAAC 566
BSNT_02468 423 GCTGGTGAGGCTGCTTTTGCTCGGCGGAATTGTTTTCATTTTAGTCAGCC 472
.||.|.||.|||||| |||| |..|||||| |||
BPUM_1376___f 567 ACTTGCGAAGCTGCT-------GGCG----------CTATTTAGT--GCC 597
BSNT_02468 473 --------CGATC----CTCTATTTA--AATC------AGGATCAAATTT 502
|| || |.|.||||| |.|| .||||.||||||
BPUM_1376___f 598 GTGATGGTCG-TCGTGACCCCATTTATTATTCTTTTTTGGGATAAAATTT 646
BSNT_02468 503 TAACTAAAGGCCGT-TTGGCGCGTTTTGAGAGTCTTGAAGACCCATTTAA 551
|.||..||...||| |||| |||||||||||||.|..||||.||.|||||
BPUM_1376___f 647 TCACGCAAAATCGTCTTGG-GCGTTTTGAGAGTTTCCAAGATCCTTTTAA 695
BSNT_02468 552 GTATGCAAATTCATCAGGTTTGCAAGTGGTCAATTCTTATTATGCGATCA 601
..|||||....|..|.||....|||.||.|.|||||.|||||.||.||..
BPUM_1376___f 696 AGATGCAGGGGCTACGGGACACCAATTGATTAATTCCTATTACGCCATTG 745
BSNT_02468 602 GCTCAGGCGGCATTTTCGGCCTGGGGCTCGGTGAAAGTATCCAAAAATAC 651
|.|||||.||..||||.||.|||||..|.||.|||||..|.|||||.|||
BPUM_1376___f 746 GATCAGGTGGTTTTTTTGGACTGGGATTAGGAGAAAGCGTTCAAAAGTAC 795
BSNT_02468 652 GGATATCTGCCTGAATCACACACTGACTTTATTATGGCTGTCATTGCTGA 701
||||||||.||.||..|||||||.||.|||||.|||||..|.|||.|.||
BPUM_1376___f 796 GGATATCTTCCAGAGCCACACACAGATTTTATCATGGCAATTATTTCAGA 845
BSNT_02468 702 AGAGCTCGGCATTTTTGGGGTATTGTTTGT----GATTTTCTTATTGGGT 747
||||||.|||.||||.||.|||||.||||| |.|.|.||| ||.
BPUM_1376___f 846 AGAGCTTGGCTTTTTCGGTGTATTTTTTGTACTCGCTCTCCTT----GGC 891
BSNT_02468 748 TTTGTCGTCATAAAAGGTTTTTATATTGCCAGAAAATGCGAGGACCCGTT 797
||..|||||.|.|||||||||||||||||.|||||.||.||.||.||.||
BPUM_1376___f 892 TTCATCGTCGTGAAAGGTTTTTATATTGCAAGAAAGTGTGAAGATCCATT 941
BSNT_02468 798 TGGAAGTCTTCTGGCGATCGGCATTTCAAGCATGATTGCCGTCCAGTCGT 847
|||||||.|.||.||.||.||.||||||..||||||||||.||||..|.|
BPUM_1376___f 942 TGGAAGTTTGCTTGCAATAGGAATTTCATCCATGATTGCCATCCAAACAT 991
BSNT_02468 848 TTATTAACCTTGGCGGTG--TCAGCGGATTAATTCCGATTACAGGGGTTA 895
..|||||..|.||||||| ||| ||..|.|||||||||||.|||||.|
BPUM_1376___f 992 GCATTAATTTAGGCGGTGTTTCA--GGTCTGATTCCGATTACTGGGGTCA 1039
BSNT_02468 896 CGCTGCCATTTATCAGTTATGGGGGCTCTTCT-TTAGTGCTGCTG-CTGG 943
||||.||.|||||.||.||.|||||.||.||| ||| |..|.||| .|||
BPUM_1376___f 1040 CGCTTCCGTTTATTAGCTACGGGGGATCGTCTATTA-TTTTACTGAGTGG 1088
BSNT_02468 944 CAAGTATGGGGATATTAGC-GAATATCAGCATGTTT-GTGAAATATTCAG 991
..|||||||.||||| || |||||||||||||||| .|| |||||..||
BPUM_1376___f 1089 -TTGTATGGGAATATT-GCTGAATATCAGCATGTTTACTG-AATATAAAG 1135
BSNT_02468 992 AGAATAAGAAAAAGAGAGAGCCTTTGGCGCCGAAGGGAATGAA-AAAGAA 1040
||..|.|.|||||||.| ||...|||||| |||..|
BPUM_1376___f 1136 AGCGTTACAAAAAGAAA---------------AAATCAATGAACAAACCA 1170
BSNT_02468 1041 ACAGCTCAAAAAAACTG-------------TTT--ATCTGTAA 1068
.|||.||||||||| || ||| ||||.||.
BPUM_1376___f 1171 TCAGTTCAAAAAAA-TGGAATGCAGAAAACTTTGAATCTTTAG 1212
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