Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02465 and BPUM_1374

See DNA alignment / Visit BSNT_02465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_02465___ylaM.1.24716.seq
#    -bsequence pep-align/BPUM_1374___gls.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02465___ylaM-BPUM_1374___gls.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02465___ylaM-BPUM_1374___gls.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02465___ylaM
# 2: BPUM_1374___gls
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     233/309 (75.4%)
# Similarity:   266/309 (86.1%)
# Gaps:           0/309 ( 0.0%)
# Score: 1212.0
# 
#
#=======================================

BSNT_02465___      1 MVCRHNDELEALVKKAKKVTDKGEVASYIPALAKADKHDLSVAIYYSNNV     50
                     |.||.|:||:..|::||||...|:||||||||.|||:.|||||:|:.:|.
BPUM_1374___g      1 MACRDNEELQRFVEEAKKVAKDGQVASYIPALGKADQTDLSVAVYHVSNT     50

BSNT_02465___     51 CLSAGDVEKTFTLQSISKVLSLALVLMEYGKDKVFSYVGQEPTGDPFNSI    100
                     |.|||||:|.||||||||||:|||||.|.|..|||.:||||||||||||:
BPUM_1374___g     51 CHSAGDVDKRFTLQSISKVLALALVLSEEGPKKVFQFVGQEPTGDPFNSM    100

BSNT_02465___    101 IKLETVNPSKPLNPMINAGALVVTSLIRGRTVKERLDYLLSFIRRLTNNQ    150
                     |||||.:|:||||||||||||.|||||||.|.:.:|..||||||.|.|::
BPUM_1374___g    101 IKLETASPNKPLNPMINAGALAVTSLIRGATPEAQLGRLLSFIRELANDK    150

BSNT_02465___    151 EITYCREVAESEYSTSMINRAMCYYMKQYGIFEDDVEAVMDLYTKQCAIE    200
                     .||||:|.|.||:.|||||||||||||||.|...:||.|||:|||||||.
BPUM_1374___g    151 SITYCKETAASEFETSMINRAMCYYMKQYHIIRGNVEEVMDVYTKQCAIM    200

BSNT_02465___    201 MNSLDLAKIGSVFALNGRHPETGEQVISKDVARICKTFMVTCGMYNASGE    250
                     |||||||||..||:|:|||||||:|::|||||||||||||||||||||||
BPUM_1374___g    201 MNSLDLAKIACVFSLDGRHPETGKQILSKDVARICKTFMVTCGMYNASGE    250

BSNT_02465___    251 FAIKVGIPAKSGVSGGIMGISPYDFGIGIFGPALDEKGNSIAGVKLLEIM    300
                     |||.:||||||||||||||.:||||||||||||||||||||||:||||:|
BPUM_1374___g    251 FAINIGIPAKSGVSGGIMGAAPYDFGIGIFGPALDEKGNSIAGIKLLELM    300

BSNT_02465___    301 SEMYRLSIF    309
                     ||.|.:|||
BPUM_1374___g    301 SEKYEMSIF    309


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