Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02463 and BPUM_1372
See
DNA alignment /
Visit
BSNT_02463 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence pep-align/BSNT_02463___ylaK.1.24716.seq
# -bsequence pep-align/BPUM_1372___phoH1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02463___ylaK-BPUM_1372___phoH1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02463___ylaK-BPUM_1372___phoH1.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02463___ylaK
# 2: BPUM_1372___phoH1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 348/442 (78.7%)
# Similarity: 390/442 (88.2%)
# Gaps: 12/442 ( 2.7%)
# Score: 1778.5
#
#
#=======================================
BSNT_02463___ 1 MSKIYVLDTNVLLQDPNAIFSFEENEVVIPAVVLEEVDSKKRYMDEVGRN 50
:||||||:|||||:||||||||||||||||||||||||:|
BPUM_1372___p 1 ----------MLLQDPNSIFSFEDNEVVIPAVVLEEVDSKKRYMDEVGQN 40
BSNT_02463___ 51 ARHVSKLIDALRQKGRLHEHVPLDTGGTLRIELNHRSFHQLQEIFIEKTN 100
||.||:|||.||.||:|||.:.|::.|||||||||||||:||||||||||
BPUM_1372___p 41 ARRVSRLIDGLRSKGKLHEKITLESKGTLRIELNHRSFHELQEIFIEKTN 90
BSNT_02463___ 101 DNRILAVAKNLSLEEETKENGRPVILVSKDVLVRVKADAIGLLAEDFLND 150
||||||||||||||||||.:||||||||||||||||||||||.|||||:|
BPUM_1372___p 91 DNRILAVAKNLSLEEETKPHGRPVILVSKDVLVRVKADAIGLQAEDFLSD 140
BSNT_02463___ 151 RVVDNDEMYSGYKDLYISQQLFSSFYGKNQISVNDVKQHAFYPNQFALMK 200
||:.|:::.:||.:|||..:..::||.:|::.:.:|....|.|:||.:||
BPUM_1372___p 141 RVLQNEDIDNGYHELYIPTEQLNTFYKQNRLPIKEVTSAPFNPHQFVIMK 190
BSNT_02463___ 201 DELGGSSSAVGIADKTGTVLKRLVFDDEHIWGIRPKNVQQTMALELLLRE 250
...|| ||:|:.|:....:||||:|.||||||||||||||||||||||.
BPUM_1372___p 191 GNEGG--SALGMLDQKAEHVKRLVYDQEHIWGIRPKNVQQTMALELLLRR 238
BSNT_02463___ 251 DIPLVTLIGKAGTGKTLLTLAAGLLQTEDLGIYKKLVVARPIVPVGKDIG 300
||||||||||||||||||.|||||:||||||::|||:|||.|||||||||
BPUM_1372___p 239 DIPLVTLIGKAGTGKTLLALAAGLMQTEDLGMFKKLIVARSIVPVGKDIG 288
BSNT_02463___ 301 YLPGEKEEKLKPWMQPIFDNLEFLFNAKKPGELDAILAGIGSIQVEALTY 350
||||||||||:||||||:||||||||.|||||||||||||||||||||||
BPUM_1372___p 289 YLPGEKEEKLRPWMQPIYDNLEFLFNTKKPGELDAILAGIGSIQVEALTY 338
BSNT_02463___ 351 IRGRSIPDQFIIIDEAQNLTRHEVKTLLTRVGEGSKIVLMGDPEQIDHPY 400
||||||||||||||||||||:|||||||||||||||||||||||||||||
BPUM_1372___p 339 IRGRSIPDQFIIIDEAQNLTKHEVKTLLTRVGEGSKIVLMGDPEQIDHPY 388
BSNT_02463___ 401 LDSLNNGLAYVVERFKGQPISGSVKLLKGERSGLAQLAADLL 442
||||||||.||:||||||.|||.|||:|||||||||||||||
BPUM_1372___p 389 LDSLNNGLTYVIERFKGQQISGHVKLVKGERSGLAQLAADLL 430
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.