Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02462 and BPUM_1371
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence pep-align/BSNT_02462___ylaJ.1.24716.seq
# -bsequence pep-align/BPUM_1371___ylaJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02462___ylaJ-BPUM_1371___ylaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02462___ylaJ-BPUM_1371___ylaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02462___ylaJ
# 2: BPUM_1371___ylaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 116/213 (54.5%)
# Similarity: 150/213 (70.4%)
# Gaps: 12/213 ( 5.6%)
# Score: 552.5
#
#
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BSNT_02462___ 1 MRIL--FIIVQLTLILSACAYQQGKQGQNVEKESTRQQETKPIHVKDTTQ 48
||:. ..:||..::|.|| ||.::.:.|:|:..||. .:.|.|:|:
BPUM_1371___y 1 MRLFLTLFMVQAIMLLGAC--QQQEKSEAVDKQDGRQH---VVRVSDSTK 45
BSNT_02462___ 49 ETKDNGTR--TDIAKHLVSVAEKNPDVKDATAVVLGGYAVVGIDVDDTLD 96
: |.|..| ||:|:|||.|.|...||.||||||:|.||||||||.|.||
BPUM_1371___y 46 K-KTNQARSSTDVAQHLVKVTEHVADVNDATAVVIGRYAVVGIDVKDDLD 94
BSNT_02462___ 97 RSKVETIKYSVAQALKNDRYGANAVVIADPDTVGRLREMSREISEGHPVT 146
||||||||||||:|||||..||||||:||||||.||:||.:||..|.||:
BPUM_1371___y 95 RSKVETIKYSVAKALKNDPEGANAVVVADPDTVSRLKEMGKEIQAGRPVS 144
BSNT_02462___ 147 GILDELAAIVGRVLPEVPNDVIDNEDEPQTKQQNDQLNRKQQQEMEKEQN 196
||:||||||||||:||:|.:.||..:...|.:.||||.:..|:.:::.||
BPUM_1371___y 145 GIMDELAAIVGRVMPEMPRNEIDRRETDPTNEPNDQLKQNDQKRLDEHQN 194
BSNT_02462___ 197 DQSDHHMKKNNND 209
|||:|||.:..
BPUM_1371___y 195 DQSNHHMNQKK-- 205
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