Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02458 and BPUM_1368

See DNA alignment / Visit BSNT_02458 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_02458___ylaG.1.24716.seq
#    -bsequence pep-align/BPUM_1368___typA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02458___ylaG-BPUM_1368___typA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02458___ylaG-BPUM_1368___typA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02458___ylaG
# 2: BPUM_1368___typA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 612
# Identity:     552/612 (90.2%)
# Similarity:   589/612 (96.2%)
# Gaps:           0/612 ( 0.0%)
# Score: 2877.0
# 
#
#=======================================

BSNT_02458___      1 MKLRNDLRNIAIIAHVDHGKTTLVDQLLHQAGTFRANEQVAERAMDSNDL     50
                     ||||.|||||||||||||||||||||||||||||||||.:||||||||||
BPUM_1368___t      1 MKLRKDLRNIAIIAHVDHGKTTLVDQLLHQAGTFRANENIAERAMDSNDL     50

BSNT_02458___     51 ERERGITILAKNTAINYKDTRINILDTPGHADFGGEVERIMKMVDGVVLV    100
                     |||||||||||||||:|||||||||||||||||||||||||||||||:||
BPUM_1368___t     51 ERERGITILAKNTAIHYKDTRINILDTPGHADFGGEVERIMKMVDGVLLV    100

BSNT_02458___    101 VDAYEGCMPQTRFVLKKALEQNLNPVVVVNKIDRDFARPEEVIDEVLDLF    150
                     |||||||||||||||||||||||.|:|||||||||||||.||:|||:|||
BPUM_1368___t    101 VDAYEGCMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPAEVVDEVIDLF    150

BSNT_02458___    151 IELDANEEQLEFPVVYASAINGTASLDPKQQDENMEALYETIIKHVPAPV    200
                     |||||.|||||||||||||||||||.|..:||||||:|:|.|:.|:|.||
BPUM_1368___t    151 IELDATEEQLEFPVVYASAINGTASNDASKQDENMESLFEAIVNHIPCPV    200

BSNT_02458___    201 DNAEEPLQFQVALLDYNDYVGRIGIGRVFRGTMKVGQQVSLMKLDGTAKS    250
                     ||.||||||||||||||||||||||||||||||:|||||:|||:||:.|.
BPUM_1368___t    201 DNHEEPLQFQVALLDYNDYVGRIGIGRVFRGTMQVGQQVALMKVDGSVKQ    250

BSNT_02458___    251 FRVTKIFGFQGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVDHQDPLP    300
                     |||||||||||||||||.|||||||||||||||||||||||||:||:.||
BPUM_1368___t    251 FRVTKIFGFQGLKRVEINEAKAGDLVAVSGMEDINVGETVCPVEHQEALP    300

BSNT_02458___    301 VLRIDEPTLQMTFVVNNSPFAGREGKYVTARKIEERLQSQLQTDVSLRVE    350
                     :||||||||||||||||||||||||||||:|||||||:.||||||||||:
BPUM_1368___t    301 ILRIDEPTLQMTFVVNNSPFAGREGKYVTSRKIEERLEQQLQTDVSLRVD    350

BSNT_02458___    351 PTASPDAWVVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCE    400
                     ||.||||||||||||||||||||||||||:||||||||||:||:||||||
BPUM_1368___t    351 PTDSPDAWVVSGRGELHLSILIENMRREGFELQVSKPEVIVKEVDGVRCE    400

BSNT_02458___    401 PVERVQIDVPEEHTGSVMESMGARKGEMVDMINNGNGQVRLIFTVPSRGL    450
                     ||||||||||||||||:|||||||||||:|||||||||||||||||||||
BPUM_1368___t    401 PVERVQIDVPEEHTGSIMESMGARKGEMIDMINNGNGQVRLIFTVPSRGL    450

BSNT_02458___    451 IGYSTEFLSLTRGFGILNHTFDSYQPMQAGQVGGRRQGVLVSMENGKATS    500
                     |||:||||||||||||||||||||||||:|||||||||||||||.||||:
BPUM_1368___t    451 IGYTTEFLSLTRGFGILNHTFDSYQPMQSGQVGGRRQGVLVSMETGKATA    500

BSNT_02458___    501 YGIQGIEDRGVIFVEPGTEVYEGMIVGEHNRDNDLVVNVSKMKQQTNVRS    550
                     |||||:|:|||||||||.|||:|||||||||:||||||||:|||||||||
BPUM_1368___t    501 YGIQGVEERGVIFVEPGVEVYQGMIVGEHNRENDLVVNVSRMKQQTNVRS    550

BSNT_02458___    551 ATKDQTTTIKKARIMSLEESLEYLNEDEYCEVTPESIRLRKKILNKNERE    600
                     ||||||.::||.||||||||||||||||||||||||||||||||:|||||
BPUM_1368___t    551 ATKDQTVSMKKPRIMSLEESLEYLNEDEYCEVTPESIRLRKKILDKNERE    600

BSNT_02458___    601 KAAKKKKTAGLS    612
                     |||||||.||||
BPUM_1368___t    601 KAAKKKKLAGLS    612


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.