Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02458 and BPUM_1368
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_02458___ylaG.1.24716.seq
# -bsequence dna-align/BPUM_1368___typA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02458___ylaG-BPUM_1368___typA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02458___ylaG-BPUM_1368___typA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02458___ylaG
# 2: BPUM_1368___typA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1850
# Identity: 1483/1850 (80.2%)
# Similarity: 1483/1850 (80.2%)
# Gaps: 22/1850 ( 1.2%)
# Score: 5881.5
#
#
#=======================================
BSNT_02458___ 1 GTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGA 50
||||||||||||||.|||||||||||||||||.|||||||||||||||||
BPUM_1368___t 1 GTGAAACTTCGAAAAGATCTTCGCAACATCGCAATTATTGCCCACGTTGA 50
BSNT_02458___ 51 CCATGGGAAAACGACTCTAGTCGATCAGCTTTTACATCAGGCTGGTACGT 100
||||||.||||||||.||.||.||.||..|..|.|||||.||||||||.|
BPUM_1368___t 51 CCATGGTAAAACGACGCTTGTTGACCAATTGCTCCATCAAGCTGGTACTT 100
BSNT_02458___ 101 TCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTT 150
|||||||.||.|||.|..|.|||||..|.||.|||||.||.||||||.|.
BPUM_1368___t 101 TCCGTGCGAATGAAAATATCGCTGAGAGAGCCATGGATTCAAATGATTTA 150
BSNT_02458___ 151 GAACGCGAACGCGGCATTACAATATTGGCGAAAAATACTGCGATTAACTA 200
||.||.||.|||||.|||||.||.||.||.||||||||||||||..|.||
BPUM_1368___t 151 GAGCGAGAGCGCGGTATTACGATTTTAGCTAAAAATACTGCGATCCATTA 200
BSNT_02458___ 201 TAAAGATACACGTATCAATATTTTGGACACCCCTGGACACGCAGACTTTG 250
||||||||||||.||.||||||||.||.||.||.||||||||.||.||.|
BPUM_1368___t 201 TAAAGATACACGCATTAATATTTTAGATACACCAGGACACGCCGATTTCG 250
BSNT_02458___ 251 GGGGAGAAGTAGAACGGATTATGAAAATGGTTGACGGCGTAGTGCTTGTC 300
|.||.||.||.||.||.||.|||||||||||.||.||.|||.|.||.||.
BPUM_1368___t 251 GTGGTGAGGTTGAGCGTATCATGAAAATGGTAGATGGTGTACTTCTCGTT 300
BSNT_02458___ 301 GTTGACGCATATGAAGGCTGTATGCCTCAAACTCGTTTTGTTCTGAAAAA 350
||.||.||.|||||||||||||||||||||||.||.|||||.||||||||
BPUM_1368___t 301 GTGGATGCTTATGAAGGCTGTATGCCTCAAACACGCTTTGTCCTGAAAAA 350
BSNT_02458___ 351 AGCTCTTGAGCAAAACCTGAAC-CCTGTTGTTGTTGTAAACAAAATTGAC 399
.||.||||||||||| ||.||| ||..||||||||||.||.|||||||||
BPUM_1368___t 351 GGCACTTGAGCAAAA-CTTAACACCAATTGTTGTTGTCAATAAAATTGAC 399
BSNT_02458___ 400 CGTGACTTTGCTCGTCCAGAGGAAGTTATCGATGAAGTTCTGGATCTGTT 449
||.||||||||||||||.|..|||||..||||||||||..|.||..||||
BPUM_1368___t 400 CGCGACTTTGCTCGTCCGGCTGAAGTAGTCGATGAAGTAATTGACTTGTT 449
BSNT_02458___ 450 CATTGAGCTTGATGCTAATGAAGAGCAGCTCGAGTTCCCAGTGGTATATG 499
||||||..|.|||||.|..|||||.|||||.||.||||||||.||.||||
BPUM_1368___t 450 CATTGAATTGGATGCGACAGAAGAACAGCTTGAATTCCCAGTTGTCTATG 499
BSNT_02458___ 500 CTTCCGCGATTAATGGAACAGCGAGTCTTGATCCGAAACAA-CAGGATGA 548
|.||.||.||.|||||.|||||.|||...|||.| ||.||| ||.|||||
BPUM_1368___t 500 CATCAGCAATCAATGGTACAGCAAGTAACGATGC-AAGCAAGCAAGATGA 548
BSNT_02458___ 549 AAACATGGAAGCTTTATATGAAACCATTATTAAGCATGTTCCGGCCCCTG 598
||||||||||.||.|.|.||||.|||||.||||.|||.|.||...|||.|
BPUM_1368___t 549 AAACATGGAATCTCTGTTTGAAGCCATTGTTAACCATATCCCTTGCCCAG 598
BSNT_02458___ 599 TTGATAATGCA-GAGGAGCCGCTTCAATTCCAAGTTGCCCTTCTTGACTA 647
||||||| .|| ||.||||||||||||||||||||.||.||.|||||.||
BPUM_1368___t 599 TTGATAA-CCATGAAGAGCCGCTTCAATTCCAAGTGGCGCTACTTGATTA 647
BSNT_02458___ 648 CAACGACTATGTAGGCCGTATCGGAATCGGACGCGTATTCCGCGGCACAA 697
|||.||.|||||.||..|.||.||.|||||.||.|||||..|.||.||||
BPUM_1368___t 648 CAATGATTATGTTGGAAGAATTGGGATCGGTCGTGTATTTAGAGGAACAA 697
BSNT_02458___ 698 TGAAAGTCGGACAGCAGGTTTCTCTT-ATGAAGCTTGACGGAACGGCAAA 746
||.||||.||||||||.||..| ||| |||||..|.|||||.|..|..||
BPUM_1368___t 698 TGCAAGTAGGACAGCAAGTAGC-CTTAATGAAAGTGGACGGCAGTGTGAA 746
BSNT_02458___ 747 GTCATTCCGTGTTACAAAGATTTTTGGTTTCCAAGGCTTAAAGCGTGTGG 796
...|||||||||.||.||||||||||||||||||||.|||||.||.||||
BPUM_1368___t 747 ACAATTCCGTGTGACGAAGATTTTTGGTTTCCAAGGGTTAAAACGAGTGG 796
BSNT_02458___ 797 AAATTGAAGAAGCAAAAGCGGGAGACCTCGTTGCGGTTTCCGGGATGGAA 846
||||..|.|||||.|||||.|||||.||.|||||.||.||.||.||||||
BPUM_1368___t 797 AAATCAACGAAGCGAAAGCAGGAGATCTTGTTGCAGTATCTGGAATGGAA 846
BSNT_02458___ 847 GATATCAACGTTGGTGAAACGGTATGTCCTGTAGACCATCAAGATCCGCT 896
||.||.|||||.|||||||||||.||||||||.||.||.|||||..|.||
BPUM_1368___t 847 GACATTAACGTAGGTGAAACGGTTTGTCCTGTTGAACACCAAGAGGCTCT 896
BSNT_02458___ 897 TCCAGTGCTTCGCATTGATGAGCCGACACTTCAAATGACATTTGTCGTGA 946
.|||.|.|||||.|||||||||||.||.|||||||||||.|||||.||||
BPUM_1368___t 897 GCCAATCCTTCGTATTGATGAGCCAACTCTTCAAATGACGTTTGTTGTGA 946
BSNT_02458___ 947 ACAACAGTCCGTTTGCAGGCCGTGAAGGCAAATATGTAACGGCCCGCAAA 996
|||||||.||.|||||||||||||||||.|||||||||||..|.||.|||
BPUM_1368___t 947 ACAACAGCCCATTTGCAGGCCGTGAAGGAAAATATGTAACATCACGTAAA 996
BSNT_02458___ 997 ATCGAAGAGCGTCTTCA-ATCA-CAGCTTCAGACGGATGTGAG-CTTGCG 1043
||.||||||||.|| | |.|| ||||||||.||.||.||.|| ||| ||
BPUM_1368___t 997 ATTGAAGAGCGCCT--AGAGCAGCAGCTTCAAACAGACGTTAGTCTT-CG 1043
BSNT_02458___ 1044 TGTTGAGCCAACAGCTTCTCCTGATGCTTGGGTTGTTTCAGGACGCGGTG 1093
||||||.|||||.|.|||.|||||||||||||||||.||.||||||||.|
BPUM_1368___t 1044 TGTTGATCCAACTGATTCGCCTGATGCTTGGGTTGTATCTGGACGCGGAG 1093
BSNT_02458___ 1094 AGCTGCACTTGTCAATTTTAATTGAAAATATGCGTCGTGAGGGCTATGAG 1143
||||.|||||.||.|||.|.|||||.||||||.|.|||||.||.|.|||.
BPUM_1368___t 1094 AGCTTCACTTATCCATTCTTATTGAGAATATGAGACGTGAAGGATTTGAA 1143
BSNT_02458___ 1144 CTTCAAGTGTCAAAACCTGAAGTTATTATCAAAGAAATCGACGGCGTACG 1193
.|.|||||.||.||.||.|||||||||.|.||||||.|.|||||.||.||
BPUM_1368___t 1144 TTACAAGTATCGAAGCCAGAAGTTATTGTAAAAGAAGTTGACGGTGTTCG 1193
BSNT_02458___ 1194 CTGTGAGCCTGTTGAACGTGTGCAAATTGATGTTCCTGAAGAGCATACTG 1243
.|||||||||||||||||.||.|||||||||||.||.|||||||||||||
BPUM_1368___t 1194 ATGTGAGCCTGTTGAACGCGTTCAAATTGATGTGCCAGAAGAGCATACTG 1243
BSNT_02458___ 1244 GCTCTGTCATGGAATCAATGGGTGCCCGCAAAGGCGAAATGGTTGATATG 1293
|||||.||||||||||||||||.||.||.|||||.||||||.||||.|||
BPUM_1368___t 1244 GCTCTATCATGGAATCAATGGGCGCACGAAAAGGTGAAATGATTGACATG 1293
BSNT_02458___ 1294 ATCAACAACGGAAACGGCCAAGTCCGTCTCATCTTTACAGTTCCTTCCCG 1343
|||||.||.||.||.||.|||||.||.||.|||||||||||.||.||.||
BPUM_1368___t 1294 ATCAATAATGGTAATGGTCAAGTTCGCCTGATCTTTACAGTGCCATCACG 1343
BSNT_02458___ 1344 CGGATTGATCGGTTACTCTACAGAATTCCTATCATTAACACGCGGATTCG 1393
.||.||.|||||.||..|.||.|||||.||.||||||||.||.||.||.|
BPUM_1368___t 1344 TGGTTTAATCGGATATACAACTGAATTTCTTTCATTAACTCGTGGTTTTG 1393
BSNT_02458___ 1394 GTATTTTGAACCATACGTTTGACAGCTACCAGCCGATGCAGGCAGGCCAA 1443
||||||||||||||||||||||||||||||||||.||||||.|.||.|||
BPUM_1368___t 1394 GTATTTTGAACCATACGTTTGACAGCTACCAGCCAATGCAGTCTGGTCAA 1443
BSNT_02458___ 1444 GTCGGCGGACGCCGTCAAGGTGTACTTGTGTCAATGGAAAACGGAAAAGC 1493
|||||||||||.|||||||||||||||||.||||||||||..||.|||||
BPUM_1368___t 1444 GTCGGCGGACGTCGTCAAGGTGTACTTGTTTCAATGGAAACAGGTAAAGC 1493
BSNT_02458___ 1494 AACATCATACGGTATTCAAGGAATTGAAGACCGCGGTGTCATCTTCGTTG 1543
.||..|.|||||.||.|||||..|||||||.||||||||.||.|||||||
BPUM_1368___t 1494 GACTGCTTACGGAATCCAAGGCGTTGAAGAGCGCGGTGTGATTTTCGTTG 1543
BSNT_02458___ 1544 AGCCGGGTACTGAAGTATACGAAGGAATGATCGTTGGAGAGCATAACCGT 1593
||||||||..||||||||||.||||||||||.|||||.||||||||||||
BPUM_1368___t 1544 AGCCGGGTGTTGAAGTATACCAAGGAATGATTGTTGGTGAGCATAACCGT 1593
BSNT_02458___ 1594 GACAACGACCTTGTTGTTAACGTCAGCAAAATGAAACAGCAAACAAACGT 1643
||.|||||.||||||||.|||||.||....||||||||.|||||||||||
BPUM_1368___t 1594 GAGAACGATCTTGTTGTCAACGTAAGTCGTATGAAACAACAAACAAACGT 1643
BSNT_02458___ 1644 CCGTTCCGCGACAAAGGATCAGAC----AACTACAATTAAAAAAGCGCGC 1689
.|||||.|||||.||.|||||.|| |.| ||.||||||.|.||.
BPUM_1368___t 1644 GCGTTCAGCGACGAAAGATCAAACGGTGAGC----ATGAAAAAACCACGT 1689
BSNT_02458___ 1690 ATCATGTCTCTTGAGGAGTCTCTAGAGTACTTAAACGAAGATGAATATTG 1739
||.|||||.||||||||.|||||.||||||||.||.||.||.|||||.||
BPUM_1368___t 1690 ATTATGTCACTTGAGGAATCTCTTGAGTACTTGAATGAGGACGAATACTG 1739
BSNT_02458___ 1740 TGAAGTAACACCTGAATCCATCCGTTTAAGAAAGAAGATCCTCAATAAGA 1789
|||.||.|||||||||||.||.||||||||||||||.||..|..||||.|
BPUM_1368___t 1740 TGAGGTTACACCTGAATCAATTCGTTTAAGAAAGAAAATTTTAGATAAAA 1789
BSNT_02458___ 1790 ACGAACGTGAAAAAGCAGCTAAAAAGAAAAAAACAGCAGGATTGTCTTAA 1839
||||||||||.||||||||.||.||||||||...|||||||||.||.|||
BPUM_1368___t 1790 ACGAACGTGAGAAAGCAGCGAAGAAGAAAAAGCTAGCAGGATTATCGTAA 1839
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