Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02455 and BPUM_1366
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence pep-align/BSNT_02455___ylaE.1.24716.seq
# -bsequence pep-align/BPUM_1366___ylaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02455___ylaE-BPUM_1366___ylaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02455___ylaE-BPUM_1366___ylaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02455___ylaE
# 2: BPUM_1366___ylaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 68/217 (31.3%)
# Similarity: 102/217 (47.0%)
# Gaps: 20/217 ( 9.2%)
# Score: 204.0
#
#
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BSNT_02455___ 1 MKKTFVKKAMLTTAAMTSAALLTF---GPDAASAKT----PVDNTAVQLQ 43
||| .:.|::.:......|.:||| .|..|||.| |.:...| ::
BPUM_1366___y 1 MKK-ILSKSLSSVVFFALAIILTFTTVAPGQASAATFKGIPFEQQQV-IK 48
BSNT_02455___ 44 HQASTNEDLNTFIDILNQCIYEQDGVYYFDSEKAVELGMTKEEAQVIATL 93
.....||.: |:||.....|:|..|.||.:||||||:|:|||......
BPUM_1366___y 49 ELLEKNERV---INILINSFVEEDNNYTFDVKKAVELGLTEEEAATAEKF 95
BSNT_02455___ 94 WESTSEFFSIVSQCVYL-EDGNYKFDTEKAVELGFTEKEALALEQFFSAV 142
.:..:....:.|:.|.. |.|...||..||||||.|::||...|:.|.:|
BPUM_1366___y 96 LDRAAVLTIVFSESVTKNEKGKLVFDAAKAVELGLTKEEAAKFEKLFKSV 145
BSNT_02455___ 143 SLKIHILQAAIVL--QDDVYSYDKDAALQAGATPLQADVYEKLFSALSQE 190
.....:...|:|| :.:|. .|...|...|.:..:..|:.::...:.||
BPUM_1366___y 146 IRIADLAGDALVLDKKGNVV-IDSKIAKGIGFSSTELLVFNQMLKKIPQE 194
BSNT_02455___ 191 QLAAIYDMIHPQA---- 203
||.::||.|....
BPUM_1366___y 195 QLKSVYDAIQIAKEKLS 211
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