Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02440 and BPUM_1364

See DNA alignment / Visit BSNT_02440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_02440.1.24716.seq
#    -bsequence pep-align/BPUM_1364.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02440-BPUM_1364.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02440-BPUM_1364.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02440
# 2: BPUM_1364
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      40/81 (49.4%)
# Similarity:    57/81 (70.4%)
# Gaps:          19/81 (23.5%)
# Score: 229.0
# 
#
#=======================================

BSNT_02440         1 MAKWDAFLQTNDLWKGRKTMRQVVKEGFKEEKNNRVAVWRLEVDYELATL     50
                                        |:|:||:|:::||.||:|||||||||||:||
BPUM_1364          1 -------------------MKQIVKQGYRQEKKNRIAVWRLEVDYELSTL     31

BSNT_02440        51 YEAMQKENEEQIEQSKNKLERLRKEWIRLNG     81
                     :||::::::.|||:||.|||||||||.:|.|
BPUM_1364         32 HEAIEQKDDIQIERSKRKLERLRKEWEQLKG     62


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.