Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02440 and BPUM_1364
See
Amino acid alignment /
Visit
BSNT_02440 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_02440.1.24716.seq
# -bsequence dna-align/BPUM_1364.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02440-BPUM_1364.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02440-BPUM_1364.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02440
# 2: BPUM_1364
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 133/246 (54.1%)
# Similarity: 133/246 (54.1%)
# Gaps: 57/246 (23.2%)
# Score: 441.0
#
#
#=======================================
BSNT_02440 1 ATGGCAAAATGGGATGCTTTTTTACAAACAAATGATCTCTGGAAGGGGCG 50
BPUM_1364 0 -------------------------------------------------- 0
BSNT_02440 51 AAAGACAATGAGGCAAGTTGTAAAAGAGGGATTTAAGGAAGAGAAAAACA 100
||||.||||.|.||.||..||||.|.||...|.|||||.||.|
BPUM_1364 1 -------ATGAAGCAAATCGTGAAGCAGGGGTATAGACAGGAGAAGAAGA 43
BSNT_02440 101 ATCGTGTTGCTGTCTGGAGACTAGAGGTTGATTATGAATTGGCAACCCTA 150
||||..|.|||||.||||||.|||||||.||.|||||..|..|.||.||.
BPUM_1364 44 ATCGCATCGCTGTGTGGAGATTAGAGGTGGACTATGAGCTTTCTACGCTT 93
BSNT_02440 151 TATGAAGCAATGCAGAAAGAAAATGAAGAGCAGATTGAACAAAGCAAAAA 200
.|||||||.||..||.||.||.||||....||.||.||||..||||||..
BPUM_1364 94 CATGAAGCCATCGAGCAAAAAGATGACATCCAAATCGAACGCAGCAAACG 143
BSNT_02440 201 CAAACTTGAGCGACTTAGAAAAGAATGGATTCGTCTTAACGGGTAA 246
.||.||||||||.||.||||||||||||...|..|||||.|||||.
BPUM_1364 144 AAAGCTTGAGCGCCTAAGAAAAGAATGGGAGCAGCTTAAAGGGTAG 189
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.