Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02440 and BPUM_1364

See Amino acid alignment / Visit BSNT_02440 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence dna-align/BSNT_02440.1.24716.seq
#    -bsequence dna-align/BPUM_1364.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02440-BPUM_1364.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02440-BPUM_1364.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02440
# 2: BPUM_1364
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     133/246 (54.1%)
# Similarity:   133/246 (54.1%)
# Gaps:          57/246 (23.2%)
# Score: 441.0
# 
#
#=======================================

BSNT_02440         1 ATGGCAAAATGGGATGCTTTTTTACAAACAAATGATCTCTGGAAGGGGCG     50
                                                                       
BPUM_1364          0 --------------------------------------------------      0

BSNT_02440        51 AAAGACAATGAGGCAAGTTGTAAAAGAGGGATTTAAGGAAGAGAAAAACA    100
                            ||||.||||.|.||.||..||||.|.||...|.|||||.||.|
BPUM_1364          1 -------ATGAAGCAAATCGTGAAGCAGGGGTATAGACAGGAGAAGAAGA     43

BSNT_02440       101 ATCGTGTTGCTGTCTGGAGACTAGAGGTTGATTATGAATTGGCAACCCTA    150
                     ||||..|.|||||.||||||.|||||||.||.|||||..|..|.||.||.
BPUM_1364         44 ATCGCATCGCTGTGTGGAGATTAGAGGTGGACTATGAGCTTTCTACGCTT     93

BSNT_02440       151 TATGAAGCAATGCAGAAAGAAAATGAAGAGCAGATTGAACAAAGCAAAAA    200
                     .|||||||.||..||.||.||.||||....||.||.||||..||||||..
BPUM_1364         94 CATGAAGCCATCGAGCAAAAAGATGACATCCAAATCGAACGCAGCAAACG    143

BSNT_02440       201 CAAACTTGAGCGACTTAGAAAAGAATGGATTCGTCTTAACGGGTAA    246
                     .||.||||||||.||.||||||||||||...|..|||||.|||||.
BPUM_1364        144 AAAGCTTGAGCGCCTAAGAAAAGAATGGGAGCAGCTTAAAGGGTAG    189


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