Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02432 and BPUM_1357
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence pep-align/BSNT_02432___pdhC.1.24716.seq
# -bsequence pep-align/BPUM_1357___pdhC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02432___pdhC-BPUM_1357___pdhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02432___pdhC-BPUM_1357___pdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02432___pdhC
# 2: BPUM_1357___pdhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 393/447 (87.9%)
# Similarity: 417/447 (93.3%)
# Gaps: 5/447 ( 1.1%)
# Score: 1975.0
#
#
#=======================================
BSNT_02432___ 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPS 50
|||||||||||||||||||||||||||||::|||||||||||||||||||
BPUM_1357___p 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEINEDDVLAEVQNDKAVVEIPS 50
BSNT_02432___ 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQ 100
||||||||||||||||||||||||||||||||:||||||:|..:||||||
BPUM_1357___p 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYENLQFKGSEEEGEAKTEAQ 100
BSNT_02432___ 101 VQSTAEAGKDVAKEEQAQ-EPAKATGAGQQDQAEVDPNKRVIAMPSVRKY 149
||.|||||.:..|:|.|| |.|.||.||.|:|.:.|||||||||||||||
BPUM_1357___p 101 VQGTAEAGNEPEKKEVAQEEAAAATDAGAQEQVDADPNKRVIAMPSVRKY 150
BSNT_02432___ 150 AREKGVDIRKVTGSGNNGRVVKEDIDSFVNGGA--QEAAPQETAAPQETA 197
|||||::|.||.|||.||||:|||||||||||: ||||||...:.:|.|
BPUM_1357___p 151 AREKGIEIYKVAGSGKNGRVLKEDIDSFVNGGSATQEAAPQAAESAKEEA 200
BSNT_02432___ 198 AKPAAAPAP--EGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVD 245
|..|||.|| |||||||||||||||||||||||||||||||||||||||
BPUM_1357___p 201 APKAAAAAPVLEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVD 250
BSNT_02432___ 246 VTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKT 295
||||||||||||||||||||||||||||||||||||||:|||||||||||
BPUM_1357___p 251 VTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKYPVLNTSIDDKT 300
BSNT_02432___ 296 DEVIQKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKARE 345
|||:||||:|||||||||||||||||||||||::||:|:|||.||||||:
BPUM_1357___p 301 DEVVQKHYYNIGIAADTEKGLLVPVVKNADRKAIFEVSNEINELATKARD 350
BSNT_02432___ 346 GKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAIVR 395
|||||||||||||||||||||||||||||||||||||||||||||||:||
BPUM_1357___p 351 GKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAVVR 400
BSNT_02432___ 396 DGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 442
|||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1357___p 401 DGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 447
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