Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02430 and BPUM_1355

See DNA alignment / Visit BSNT_02430 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_02430___pdhA.1.24716.seq
#    -bsequence pep-align/BPUM_1355___pdhA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02430___pdhA-BPUM_1355___pdhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02430___pdhA-BPUM_1355___pdhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02430___pdhA
# 2: BPUM_1355___pdhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity:     336/371 (90.6%)
# Similarity:   352/371 (94.9%)
# Gaps:           0/371 ( 0.0%)
# Score: 1724.0
# 
#
#=======================================

BSNT_02430___      1 MAAKTKKAIVDSKKQFDAIKKQFETFQILNEKGEVVNEAAMPDLTDDQLK     50
                     ||||||||||||||||||||||||||||||||||||||||||||:|||||
BPUM_1355___p      1 MAAKTKKAIVDSKKQFDAIKKQFETFQILNEKGEVVNEAAMPDLSDDQLK     50

BSNT_02430___     51 ELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDF    100
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BPUM_1355___p     51 ELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQLATHFALEKEDF    100

BSNT_02430___    101 VLPGYRDVPQLIWHGLPLYQAFLFSRGHFRGNQMPDDVNALSPQIIIGAQ    150
                     :|||||||||||||||||.:|||||||||.|||||:||.|||||||||||
BPUM_1355___p    101 ILPGYRDVPQLIWHGLPLTKAFLFSRGHFVGNQMPEDVYALSPQIIIGAQ    150

BSNT_02430___    151 YIQTAGVALGIKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIF    200
                     .||.||||||:|||||.|||||||||||||||||||||||||||||||||
BPUM_1355___p    151 IIQAAGVALGLKKRGKNAVAITYTGDGGASQGDFYEGINFAGAYKAPAIF    200

BSNT_02430___    201 VVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAE    250
                     |||||||||||||||||||:||||||.|||||||||||||.|||||||||
BPUM_1355___p    201 VVQNNRYAISTPVEKQSAAQTIAQKAAAAGIVGVQVDGMDALAVYAATAE    250

BSNT_02430___    251 ARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTKEIENEWEQKDPLV    300
                     |||||:||||||||||||||||||||||||||:|||||.|||||||||||
BPUM_1355___p    251 ARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKEDENEWEQKDPLV    300

BSNT_02430___    301 RFRAFLENKGLWSEEEEAKVIEDAKEEIKQAIKKADAEPKQKVTDLMKIM    350
                     |:|.|||||||||||||.||||||||:||||||:||.:||||||||::.|
BPUM_1355___p    301 RYRKFLENKGLWSEEEENKVIEDAKEQIKQAIKEADEQPKQKVTDLIENM    350

BSNT_02430___    351 YEKMPHNLEEQFEIYTQKESK    371
                     |:..|.||.||.|||.|||||
BPUM_1355___p    351 YDVKPFNLVEQLEIYKQKESK    371


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