Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02430 and BPUM_1355
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_02430___pdhA.1.24716.seq
# -bsequence pep-align/BPUM_1355___pdhA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02430___pdhA-BPUM_1355___pdhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02430___pdhA-BPUM_1355___pdhA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02430___pdhA
# 2: BPUM_1355___pdhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 336/371 (90.6%)
# Similarity: 352/371 (94.9%)
# Gaps: 0/371 ( 0.0%)
# Score: 1724.0
#
#
#=======================================
BSNT_02430___ 1 MAAKTKKAIVDSKKQFDAIKKQFETFQILNEKGEVVNEAAMPDLTDDQLK 50
||||||||||||||||||||||||||||||||||||||||||||:|||||
BPUM_1355___p 1 MAAKTKKAIVDSKKQFDAIKKQFETFQILNEKGEVVNEAAMPDLSDDQLK 50
BSNT_02430___ 51 ELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDF 100
||||||||||||||||||||||||||||||||||||||:|||||||||||
BPUM_1355___p 51 ELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQLATHFALEKEDF 100
BSNT_02430___ 101 VLPGYRDVPQLIWHGLPLYQAFLFSRGHFRGNQMPDDVNALSPQIIIGAQ 150
:|||||||||||||||||.:|||||||||.|||||:||.|||||||||||
BPUM_1355___p 101 ILPGYRDVPQLIWHGLPLTKAFLFSRGHFVGNQMPEDVYALSPQIIIGAQ 150
BSNT_02430___ 151 YIQTAGVALGIKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIF 200
.||.||||||:|||||.|||||||||||||||||||||||||||||||||
BPUM_1355___p 151 IIQAAGVALGLKKRGKNAVAITYTGDGGASQGDFYEGINFAGAYKAPAIF 200
BSNT_02430___ 201 VVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAE 250
|||||||||||||||||||:||||||.|||||||||||||.|||||||||
BPUM_1355___p 201 VVQNNRYAISTPVEKQSAAQTIAQKAAAAGIVGVQVDGMDALAVYAATAE 250
BSNT_02430___ 251 ARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTKEIENEWEQKDPLV 300
|||||:||||||||||||||||||||||||||:|||||.|||||||||||
BPUM_1355___p 251 ARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKEDENEWEQKDPLV 300
BSNT_02430___ 301 RFRAFLENKGLWSEEEEAKVIEDAKEEIKQAIKKADAEPKQKVTDLMKIM 350
|:|.|||||||||||||.||||||||:||||||:||.:||||||||::.|
BPUM_1355___p 301 RYRKFLENKGLWSEEEENKVIEDAKEQIKQAIKEADEQPKQKVTDLIENM 350
BSNT_02430___ 351 YEKMPHNLEEQFEIYTQKESK 371
|:..|.||.||.|||.|||||
BPUM_1355___p 351 YDVKPFNLVEQLEIYKQKESK 371
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.