Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02422 and BPUM_1351

See DNA alignment / Visit BSNT_02422 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_02422___ykrA.1.24716.seq
#    -bsequence pep-align/BPUM_1351___ykrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02422___ykrA-BPUM_1351___ykrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02422___ykrA-BPUM_1351___ykrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02422___ykrA
# 2: BPUM_1351___ykrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     165/259 (63.7%)
# Similarity:   207/259 (79.9%)
# Gaps:           2/259 ( 0.8%)
# Score: 879.0
# 
#
#=======================================

BSNT_02422___      1 MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLV     50
                     |:.|:||||||||:|||||.|||||::.|..|:.:|||:||||||||||:
BPUM_1351___y      1 MNKKVIFFDIDGTLYDHDKKIPESTKRAVHLLKEKGHHLFIASGRSPFLI     50

BSNT_02422___     51 KPILEELGIHSFISYNGQFVVFENQVIYKNPLPENAIRRLLKQADEGKHP    100
                     ||||||||:.|||:||||:|::|.:|||.|||....:.::.:.||...||
BPUM_1351___y     51 KPILEELGLDSFIAYNGQYVMYEGEVIYGNPLKLELMEKIYETADRQDHP    100

BSNT_02422___    101 VVFMAEDTMKATVADHPHVLEGIGSLKTDYPETDDLFYEGKEIFQLLLFC    150
                     :|||.|..:||:|.:||.:.||||:||..:||.|..:::..||||:||||
BPUM_1351___y    101 LVFMGEKALKASVPNHPFIHEGIGTLKIKHPEHDLSYFKENEIFQILLFC    150

BSNT_02422___    151 QDEEEKAYAAF-PEFDLVRWHELSTDVLPHGGSKAEGIKKVIERLPFDIG    199
                     :.|||..|.|| .|.||||||||||||:|.|||||||||:||||||::..
BPUM_1351___y    151 KAEEEVKYEAFSEEIDLVRWHELSTDVVPKGGSKAEGIKRVIERLPYEQK    200

BSNT_02422___    200 DTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKPVDEDGIAYA    249
                     ||.||||||||.:||.:.||||||||||.|||::|||||||||||||.:|
BPUM_1351___y    201 DTVAFGDGLNDREMISFAGTGVAMGNAVNELKDLADFVTKPVDEDGIFHA    250

BSNT_02422___    250 AKELGLLK-    257
                     ...|||:: 
BPUM_1351___y    251 VTHLGLIEE    259


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