Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02420 and BPUM_1350

See DNA alignment / Visit BSNT_02420 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_02420___ykzG.1.24716.seq
#    -bsequence pep-align/BPUM_1350___ykzG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02420___ykzG-BPUM_1350___ykzG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02420___ykzG-BPUM_1350___ykzG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02420___ykzG
# 2: BPUM_1350___ykzG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      52/69 (75.4%)
# Similarity:    59/69 (85.5%)
# Gaps:           0/69 ( 0.0%)
# Score: 270.0
# 
#
#=======================================

BSNT_02420___      1 MIYKVFYQEKADEVPVREKTDSLYIEGVSERDVRTKLKEKKFNIEFITPV     50
                     ||||||:|....||||||.|||||:|.|||||||.|||:..:|||||.||
BPUM_1350___y      1 MIYKVFFQASTTEVPVREHTDSLYVEAVSERDVRDKLKKHSYNIEFIQPV     50

BSNT_02420___     51 DGAFLEYEQQSENFKVLEL     69
                     |||||:||::|||||||||
BPUM_1350___y     51 DGAFLDYERESENFKVLEL     69


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.