Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02420 and BPUM_1350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence dna-align/BSNT_02420___ykzG.1.24716.seq
# -bsequence dna-align/BPUM_1350___ykzG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02420___ykzG-BPUM_1350___ykzG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02420___ykzG-BPUM_1350___ykzG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02420___ykzG
# 2: BPUM_1350___ykzG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 160/217 (73.7%)
# Similarity: 160/217 (73.7%)
# Gaps: 14/217 ( 6.5%)
# Score: 564.0
#
#
#=======================================
BSNT_02420___ 1 ATGATTTATAAGGTATTTTATCAAG--AGAAGGCTGAC-GAAGTACCTGT 47
|||||.|||||||||||||.|||.| ||.| || || ||.||||||||
BPUM_1350___y 1 ATGATATATAAGGTATTTTTTCAGGCAAGTA--CT-ACTGAGGTACCTGT 47
BSNT_02420___ 48 TCGGGAAAAGACAGATTCACTTTATATTGAAGGCGTATCTGAGCGTGACG 97
..|.|||.|.|||||||||||.||..||||||..||.|||||..|.||||
BPUM_1350___y 48 AAGAGAACACACAGATTCACTATACGTTGAAGCAGTTTCTGAAAGAGACG 97
BSNT_02420___ 98 TCAGAAC----AAAGCTGAAAGAAAAGAAATTTAATATTGAGTTTATTAC 143
| || .|||.|||||.||.|.|..|..||.|||||.||.|||..
BPUM_1350___y 98 T----ACGCGATAAGTTGAAAAAACATAGCTACAACATTGAATTCATTCA 143
BSNT_02420___ 144 ACCTGTTGATGGTGCATTCTTAGAATATGAACAACAGAGCGAAAATTTTA 193
||||||.||.|||||.||.|||||.|||||||.|.|.||.||||||||||
BPUM_1350___y 144 ACCTGTAGACGGTGCTTTTTTAGACTATGAACGAGAAAGTGAAAATTTTA 193
BSNT_02420___ 194 AAGTATTGGAGTTATGA 210
|||||||||||.|||||
BPUM_1350___y 194 AAGTATTGGAGCTATGA 210
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