Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02418 and BPUM_1348

See DNA alignment / Visit BSNT_02418 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_02418___adeC.1.24716.seq
#    -bsequence pep-align/BPUM_1348___adeC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02418___adeC-BPUM_1348___adeC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02418___adeC-BPUM_1348___adeC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02418___adeC
# 2: BPUM_1348___adeC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     376/579 (64.9%)
# Similarity:   466/579 (80.5%)
# Gaps:           5/579 ( 0.9%)
# Score: 1954.5
# 
#
#=======================================

BSNT_02418___      1 MNKEALVNRLNASAKRQKADIVIKNGKIMDVYNQEWIYEDIAITDGVIVG     50
                     |:||...:::..:|||:||.:|||:.|:|||:|||||..|:|:.:|.|||
BPUM_1348___a      1 MDKELFRHQIEVAAKRKKAALVIKHAKVMDVFNQEWIDADVAVENGQIVG     50

BSNT_02418___     51 LGEYEGENIIDAEGQMIVPGFIDGHVHIESSMVTPIEFAKAVLPHGVTTV    100
                     :||||||..:||.|||:||||||||||||||||||.||:|||:|||||||
BPUM_1348___a     51 IGEYEGEQELDAVGQMLVPGFIDGHVHIESSMVTPAEFSKAVVPHGVTTV    100

BSNT_02418___    101 VTDPHEIANVSGEKGIVFMIEQARHTPLNIHFMLPSSVPAASFERSGAIL    150
                     ||||||||||||..||.||:|:|:...|:|:|||||.|||.|||||||.|
BPUM_1348___a    101 VTDPHEIANVSGITGIRFMLEEAKKAALHIYFMLPSCVPAVSFERSGATL    150

BSNT_02418___    151 KAADLKPFYGEEEVLGLAEVMDYVSVQQAEEDMVQKLLDARVAGKRIDGH    200
                     ||.||||.|.|:||||||||||||.|:||||||:||||||:...|.||||
BPUM_1348___a    151 KAKDLKPLYQEKEVLGLAEVMDYVGVEQAEEDMLQKLLDAQHENKLIDGH    200

BSNT_02418___    201 LAGLSTDLINIYRTAFVLNDHEVTSKEEALNRIRRGMYVMMREGSVAKNT    250
                     ||||:..|||:||||.|..|||||:.:|||.|::||||||:||||||||.
BPUM_1348___a    201 LAGLTDRLINVYRTASVQTDHEVTTAQEALERVKRGMYVMLREGSVAKNV    250

BSNT_02418___    251 LNVLPAVNEKNARRFFFCTDDKHVDDLLSEGSVNHQVKMAIQAGLDPFLA    300
                     .||||||||||||||||||||||:|||:::||::.||:|:|:.|||||||
BPUM_1348___a    251 KNVLPAVNEKNARRFFFCTDDKHLDDLMAQGSIDEQVRMSIKEGLDPFLA    300

BSNT_02418___    301 YQLGSLNAAECYGLDTKGAIAPGYDADLLFVSDLENVTVTMTMVKGQTVA    350
                     ||:||||||||:||.||||||||||||.:.|||..:|.:|...:.|:.||
BPUM_1348___a    301 YQMGSLNAAECFGLKTKGAIAPGYDADFMLVSDFHHVDITSVFIAGELVA    350

BSNT_02418___    351 EDSKAVYQDHASTAAPDQALLDSVKLAAPLNKQDFHMPIDSEQQINVIQI    400
                     ::.:  |:......||..|||.||. |..:.::|..:||..:|.:|||:|
BPUM_1348___a    351 QNGE--YKPSVEKIAPSPALLQSVH-AIDVQEEDIALPITGDQHMNVIRI    397

BSNT_02418___    401 IPNQLETRLVQV-PAPDAREFEPDTEFDLLKIAVVERHKGLKETGLGVVK    449
                     |||||||:|.|| |:....:|..||..|:||:.:||||:||.|.|:|:|.
BPUM_1348___a    398 IPNQLETKLEQVSPSEMNGQFTSDTGRDVLKMVLVERHQGLSEMGVGIVS    447

BSNT_02418___    450 GFGFKSGAIATTISHDSHNIIAVGTNDEDIAAAVNKLQEIGGGLTIIKNG    499
                     |||.|.||||||::|||||:|||||||.||..|:..|:|.|||||::|.|
BPUM_1348___a    448 GFGIKQGAIATTVAHDSHNLIAVGTNDADIIKAIEALKEAGGGLTVVKEG    497

BSNT_02418___    500 EELHSVPLPIAGLLSDQSAEQVNQSLLTLHDKLPLIGFTGGFNPFLTLSF    549
                     :.||::||||:||||||.|..||:||.:||:.|...||:..|||||||||
BPUM_1348___a    498 QSLHTLPLPISGLLSDQPAHLVNESLHSLHEALKETGFSLDFNPFLTLSF    547

BSNT_02418___    550 LALPVIPDIKMTTTGLFDVKSFQHISLQ-    577
                     ||||||||:||||.|||||::|||:.:| 
BPUM_1348___a    548 LALPVIPDVKMTTKGLFDVRNFQHLPIQS    576


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02418 and BPUM_1348

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
