Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02416 and BPUM_1347
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence pep-align/BSNT_02416___ykqB.1.24716.seq
# -bsequence pep-align/BPUM_1347___ktrC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02416___ykqB-BPUM_1347___ktrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02416___ykqB-BPUM_1347___ktrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: BPUM_1347___ktrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 183/222 (82.4%)
# Similarity: 208/222 (93.7%)
# Gaps: 1/222 ( 0.5%)
# Score: 939.0
#
#
#=======================================
BSNT_02416___ 1 MKKEFAVIGLGRFGGSICKALSEEGVEVMAMDIDEDKVNEYAKIASHAVI 50
||||:||||||||||||||||||||:||||||::||:|||||||||||||
BPUM_1347___k 1 MKKEYAVIGLGRFGGSICKALSEEGLEVMAMDMNEDRVNEYAKIASHAVI 50
BSNT_02416___ 51 GDSTDESVLKNLGLRNFDHVIVAIGENIQASILTTLILKELGVHTITVKA 100
||||||:||||||:|||||||||||||||||||||::||||||..:||||
BPUM_1347___k 51 GDSTDENVLKNLGIRNFDHVIVAIGENIQASILTTIMLKELGVKMVTVKA 100
BSNT_02416___ 101 QNDYHEKVLSKIGADHIVHPERDMAKRIAHNIVSNNVLDYLELSEEHSLV 150
|||||||||:|||||.:|||||||.:||||.|:|||||||||||:|:||:
BPUM_1347___k 101 QNDYHEKVLNKIGADRVVHPERDMGRRIAHKIISNNVLDYLELSDEYSLI 150
BSNT_02416___ 151 EIVANSRLAGNTLLDLDIRAKYGINIVAIKRGKEVIVSPLATEVIHQEDI 200
|||||:||||::||||||||:||||||||||||||||||||.|:|.:|||
BPUM_1347___k 151 EIVANNRLAGHSLLDLDIRARYGINIVAIKRGKEVIVSPLADEMIQKEDI 200
BSNT_02416___ 201 LIVIGSVTDISRFEKRVLHTK- 221
|||||:|.||.|||||.:...
BPUM_1347___k 201 LIVIGAVADIGRFEKREMQNDY 222
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