Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02416 and BPUM_1347
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence dna-align/BSNT_02416___ykqB.1.24716.seq
# -bsequence dna-align/BPUM_1347___ktrC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02416___ykqB-BPUM_1347___ktrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02416___ykqB-BPUM_1347___ktrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02416___ykqB
# 2: BPUM_1347___ktrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 680
# Identity: 493/680 (72.5%)
# Similarity: 493/680 (72.5%)
# Gaps: 25/680 ( 3.7%)
# Score: 1791.5
#
#
#=======================================
BSNT_02416___ 1 ATGAAAAAAGAATTTGCGGTAATTGGGCTGGGCCGTTTTGGTGGCAGTAT 50
||||||||.||||.||||||.|||||.||.||.||.||||||||.|||||
BPUM_1347___k 1 ATGAAAAAGGAATATGCGGTCATTGGTCTTGGACGCTTTGGTGGAAGTAT 50
BSNT_02416___ 51 TTGCAAAGCATTAAGCGAAGAAGGCGTCGAGGTTATGGCAATGGATATCG 100
||||||.||..|.|||||||||||..|.||.||.||||||||||||||..
BPUM_1347___k 51 TTGCAAGGCGCTGAGCGAAGAAGGACTTGAAGTCATGGCAATGGATATGA 100
BSNT_02416___ 101 ATGAAGATAAAGTCAACGAGTATGCCAAGATTGCATCTCACGCAGTTATC 150
||||||||..|||.||||||||.||.||.|||||.||.||.||.|||||.
BPUM_1347___k 101 ATGAAGATCGAGTAAACGAGTACGCGAAAATTGCCTCACATGCGGTTATT 150
BSNT_02416___ 151 GGTGATTCGACAGACGAATCTGTCCTGAAAAATTTAGGCCTGCGAAATTT 200
|||||||||||.||||||...||..|.||||||.|.||..|.||.|||||
BPUM_1347___k 151 GGTGATTCGACGGACGAAAACGTTTTAAAAAATCTTGGTATTCGCAATTT 200
BSNT_02416___ 201 TGACCACGTTATTGTAGCAATCGGGGAAAATATTCAAGCGAGTATTTTAA 250
|||.||.||.||.||.||.||.||.|||||.|||||.||.||||||||||
BPUM_1347___k 201 TGATCATGTCATCGTTGCGATTGGCGAAAACATTCAGGCAAGTATTTTAA 250
BSNT_02416___ 251 CGACACTCATTCTGAAAGAACTTGGCGTCCATACGATTACAGTTAAAGCG 300
|.||..|.||.||||||||.||||||||..|.|.|.|.||.||.||||||
BPUM_1347___k 251 CAACGATTATGCTGAAAGAGCTTGGCGTGAAAATGGTCACTGTGAAAGCG 300
BSNT_02416___ 301 CAGAACGATTATCACGAAAAAGTGCTGTCTAAAATTGGTGCGGATCACAT 350
||.||.|||||.||.|||||.|||||....||||||||.|||||||.|.|
BPUM_1347___k 301 CAAAATGATTACCATGAAAAGGTGCTTAACAAAATTGGAGCGGATCGCGT 350
BSNT_02416___ 351 CGTCCACCCGGAACGCGATATGGCAAAACGAATTGCGCATAATATCGTGT 400
|||.||.||.||.||.|||||||..|.|||.|||||.|||||.|||.|.|
BPUM_1347___k 351 CGTTCATCCAGAGCGAGATATGGGGAGACGGATTGCACATAAGATCATTT 400
BSNT_02416___ 401 CCAACAATGTACTTGACTATTTGGAGCTGTCTGAAGAGCATAGTCTTGTT 450
|.||.||.||.|||||.||..|.||.|||||.||.|||.|.||.||..||
BPUM_1347___k 401 CAAATAACGTGCTTGATTACCTCGAACTGTCAGATGAGTACAGCCTGATT 450
BSNT_02416___ 451 GAAATCGTAGCTAACAGCCGCCTGGCTGGAAATACGCTTCTCGATTTAGA 500
||.|||||.||.||||.|.|.||.||.|||.||.|.|||||.|||.|.||
BPUM_1347___k 451 GAGATCGTTGCAAACAACAGGCTTGCGGGACATTCTCTTCTAGATCTTGA 500
BSNT_02416___ 501 TATTCGCGCAAAATACGGTATTAACATCGTAGCCATAAAAAGGGGCAAGG 550
||||.|.||||.|||||||||.||.||.||.||.||.||..|.||.||||
BPUM_1347___k 501 TATTAGGGCAAGATACGGTATCAATATTGTTGCGATCAAGCGCGGAAAGG 550
BSNT_02416___ 551 AAGTCATCGTATCACCGCTTGCAACCGAAGTCATCCACCAAGAAGATATA 600
|||||||.||.||.|||||.|||...|||.|.|||||..||||||||||.
BPUM_1347___k 551 AAGTCATTGTTTCCCCGCTGGCAGATGAAATGATCCAAAAAGAAGATATC 600
BSNT_02416___ 601 CTCATTGTTATTGGATCAGTTACAGACATCTCCCGTTTCGAAAAAAGAGT 650
||||||||.|||||..||||..|.||.||....||.||.||||||.|||
BPUM_1347___k 601 CTCATTGTCATTGGGGCAGTAGCCGATATAGGACGCTTTGAAAAACGAG- 649
BSNT_02416___ 651 TCTTCATACAAAAT--AG------------ 666
|||| ||
BPUM_1347___k 650 ----------AAATGCAGAACGATTATTAA 669
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