Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02415 and BPUM_1346

See DNA alignment / Visit BSNT_02415 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_02415___ykqA.1.24716.seq
#    -bsequence pep-align/BPUM_1346.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02415___ykqA-BPUM_1346.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02415___ykqA-BPUM_1346.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02415___ykqA
# 2: BPUM_1346
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     142/285 (49.8%)
# Similarity:   189/285 (66.3%)
# Gaps:          15/285 ( 5.3%)
# Score: 700.5
# 
#
#=======================================

BSNT_02415___      1 -MNSLLFVYGTLRKHEKNH-------HLLAQSACINEQARTKGSLFAAKE     42
                      ...:|||||||.:|||:|       .|||:||.::.:....|..:.|. 
BPUM_1346          1 MTVKVLFVYGTLLQHEKHHETYMKESRLLAKSAWMSGRIYDTGQGYPAC-     49

BSNT_02415___     43 VPTAVFNDEDEGYIYGEVYEADELCIHKLDQFFQGYHKQTVFVETDVGIK     92
                     :|.      ::|.:|||:||.....::|:|...:||.||.:.|.||.|..
BPUM_1346         50 IPA------EKGTVYGELYEVTADALNKIDVLEEGYDKQEINVMTDRGQL     93

BSNT_02415___     93 IALIYFMNKDGCAGFTKISSGDWKEHQMISKSKNPIYYFAYGSCMDNARF    142
                     .|:.|.:.:...:...:|..|.||.:|:..:..:..||||||||||:|||
BPUM_1346         94 AAVTYTLPEQKASVLKEIKRGCWKAYQLWQQKPSSFYYFAYGSCMDDARF    143

BSNT_02415___    143 QKAGVDHYFQDPVGRAVLKGYTTRFTLKREDGSRADMLEDGGTTEGVLYR    192
                     :.|.|||:|:..:|..||.|:||||||.|.|||||||:||||.||||||.
BPUM_1346        144 KLAEVDHHFKQIIGGGVLNGFTTRFTLVRPDGSRADMVEDGGETEGVLYE    193

BSNT_02415___    193 IPYSALSYLYKREGVESLTYRPAFVDVEAGGRHYKDCLTFLVLQKEAEIA    242
                     :|:.|:.||||||||...|||||||||:.|.:.|:||||||||||..|||
BPUM_1346        194 VPFDAIRYLYKREGVYEGTYRPAFVDVKIGDQMYEDCLTFLVLQKSEEIA    243

BSNT_02415___    243 PPQHYQIEIERGAELYLSPEFTEKLKRHMNSLPKG    277
                     ||.||:.|||:||:||||..|.:|::.||:||.|.
BPUM_1346        244 PPTHYRSEIEKGADLYLSEAFRKKIRSHMDSLIKP    278


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