Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02414 and BPUM_1345
See
DNA alignment /
Visit
BSNT_02414 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence pep-align/BSNT_02414___kinC.1.24716.seq
# -bsequence pep-align/BPUM_1345___kinC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02414___kinC-BPUM_1345___kinC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02414___kinC-BPUM_1345___kinC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02414___kinC
# 2: BPUM_1345___kinC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 224/454 (49.3%)
# Similarity: 310/454 (68.3%)
# Gaps: 28/454 ( 6.2%)
# Score: 1196.0
#
#
#=======================================
BSNT_02414___ 1 ------------------MRKYQARIISIILAMIFIMFWDYLFYFIGKNP 32
.:.||.||:..:||.|.|:.||: ||::|...
BPUM_1345___k 1 MENGTIDKESQGGRWNHLNKTYQVRIVLSVLAFILILSWDF-FYYLGGYQ 49
BSNT_02414___ 33 INWPVDIVYTAVTLVSVWMLAYYIDEKQQLVKKMKDNEWKYKQLSEEKNR 82
||||:|:.:|.:.:..:|:::.|:|....||..:...|.:..:|:|..||
BPUM_1345___k 50 INWPLDLAFTVLVITGIWVISGYVDRLNLLVSDLNTREKEAHELTERLNR 99
BSNT_02414___ 83 IMDNLQEIVFQTNAKGEITYLNQAWASITGFSISECMGTMYNDYFIKEKH 132
|.||||||||:||.||||.:|||||..:||:.|.||:|||||.||.:|:.
BPUM_1345___k 100 ITDNLQEIVFETNEKGEIIFLNQAWTQMTGYDIDECLGTMYNQYFDQEER 149
BSNT_02414___ 133 VADHINTQIQNKASSGMFTAKYVTKNGTIFWGEVHYKLYYDRDDQFTGSL 182
|..|:.:.|:....:|....:.:.|.|...||:||||||:|...||||.:
BPUM_1345___k 150 VVQHLLSVIKEHKDAGRVELQLLHKEGKKVWGDVHYKLYFDEHHQFTGGI 199
BSNT_02414___ 183 GTMSDITERKEAEDELIEINERLARESQKLSITSELAAGIAHEVRNPLTS 232
||::|||::|:|:.||...|::|..::|||::..::||||||||||||||
BPUM_1345___k 200 GTVADITKQKQAKLELERSNQQLQMQAQKLAVAGQIAAGIAHEVRNPLTS 249
BSNT_02414___ 233 VSGFLQIMKTQYPDRKDYFDIIFSEIKRIDLVLSELL-LAKPQAITFKTH 281
|:||||:||||||:|.||||||||||||||.|||||| |||||::.|:..
BPUM_1345___k 250 VNGFLQLMKTQYPERTDYFDIIFSEIKRIDFVLSELLVLAKPQSVHFQEV 299
BSNT_02414___ 282 QLNEILKQVTTLLDTNAILSNIVIEKNFKETDGCMINGDENQLKQVFINI 331
||:|:|:||.|||.|||:||||.:::.||..|...|..|.||:||:|||:
BPUM_1345___k 300 QLHELLEQVITLLKTNAVLSNIDLKQPFKRQDAGAILADANQMKQLFINL 349
BSNT_02414___ 332 IKNGIEAMPKGGVVTISTAKTASHAVISVKDEGNGMPQEKLKQIGKPFYS 381
|||.|||||:||.:.|||.|..:...|:::|||.||.:|.:::|..||:|
BPUM_1345___k 350 IKNAIEAMPEGGSIYISTEKVLNEWKITIQDEGKGMSEEDIQKIYDPFFS 399
BSNT_02414___ 382 TKEKGTGLGLPICLRILKEHDGELKIESEAGKGSVFQVVLPLKSDS---- 427
||::||||||.||..|||:|.|.:.:.||.|||:.|.:.||:...|
BPUM_1345___k 400 TKKEGTGLGLTICATILKDHHGRMDVSSELGKGTAFHIYLPVCQKSRQQQ 449
BSNT_02414___ 427 ---- 427
BPUM_1345___k 450 VERT 453
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.