Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02406 and BPUM_1339

See DNA alignment / Visit BSNT_02406 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_02406.1.24716.seq
#    -bsequence pep-align/BPUM_1339___ykpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02406-BPUM_1339___ykpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02406-BPUM_1339___ykpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02406
# 2: BPUM_1339___ykpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 551
# Identity:     396/551 (71.9%)
# Similarity:   430/551 (78.0%)
# Gaps:         103/551 (18.7%)
# Score: 2043.5
# 
#
#=======================================

BSNT_02406         1 MIAVNNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKVLSGE     50
                     ||||||||||||||||||:||||||||||||||||||||||||||:||||
BPUM_1339___y      1 MIAVNNVSLRFADRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGE     50

BSNT_02406        51 IEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKD    100
                     ||.||||||||||||||:||||||||||:||||||:|||||||:||||||
BPUM_1339___y     51 IEAQTGDVHMSPGERLAILKQNHFEYEEFEVLKVVMMGHKRLYDVMQEKD    100

BSNT_02406       101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHT    150
                     ||||||||||||||||||||||||||||||||||||||||||||.|.|.:
BPUM_1339___y    101 AIYMKPDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGIPESLQS    150

BSNT_02406       151 KKMADLGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN    200
                     |||::|||||||||||||||||||||||||||||||||||||||||||||
BPUM_1339___y    151 KKMSELGGSEKVKVLLAQALFGKPDVLLLDEPTNHLDLQAIQWLEEFLIN    200

BSNT_02406       201 FENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFWYESSQLALKL    250
                     |||||||||||||||||||||||||||.|||:||||||||||||||||||
BPUM_1339___y    201 FENTVIVVSHDRHFLNKVCTHIADLDFGKIQVYVGNYDFWYESSQLALKL    250

BSNT_02406       251 SQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS    300
                     ||:||||||||||||||||||||||||||||||||||||:||:|||||||
BPUM_1339___y    251 SQDANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLDKISLDDIKPS    300

BSNT_02406       301 SRRYPYVNFTPEREIGNDVLRVEGLTKTIDGVKVLDNVSFIMNREDKIAF    350
                     ||:||||:|.||||||||||:||||:||||||||||||||||||||||||
BPUM_1339___y    301 SRKYPYVHFAPEREIGNDVLQVEGLSKTIDGVKVLDNVSFIMNREDKIAF    350

BSNT_02406       351 TGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDL    400
                     ..||||||:|||||::||||.|:||:|||||||||:|||||||||||:|:
BPUM_1339___y    351 LSRNELAVSTLFKILAGEMEPDNGTYKWGVTTSQAFFPKDNSEYFEGNDV    400

BSNT_02406       401 NLVDWLRQYSPHDQSESFLRGFLDACCSLEKKSTKKQMYFPGE---KRSA    447
                     :||||||||||:|||||||||||.            :|.|.||   |:::
BPUM_1339___y    401 DLVDWLRQYSPNDQSESFLRGFLG------------RMLFSGEEVKKKAS    438

BSNT_02406       448 VCC---RKRCFLAPIF----------------------------------    460
                     |..   :.||.|:.:.                                  
BPUM_1339___y    439 VLSGGEKVRCMLSKMMLSGANVLLLDEPTNHLDLESITALNNGLMSFKGA    488

BSNT_02406       460 --------------------------------------------------    460
                                                                       
BPUM_1339___y    489 MLFSSHDHQFVETVANRIIEVTPNGIVDKQTTYDEFLSDQEIQKRLVELY    538

BSNT_02406       460 -    460
                      
BPUM_1339___y    539 A    539


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02406 and BPUM_1339

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
