Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02405 and BPUM_1338

See DNA alignment / Visit BSNT_02405 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_02405___ykoA.1.24716.seq
#    -bsequence pep-align/BPUM_1338___ykoA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02405___ykoA-BPUM_1338___ykoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02405___ykoA-BPUM_1338___ykoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02405___ykoA
# 2: BPUM_1338___ykoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      59/91 (64.8%)
# Similarity:    67/91 (73.6%)
# Gaps:           2/91 ( 2.2%)
# Score: 291.0
# 
#
#=======================================

BSNT_02405___      1 MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRL     50
                     ||||||.||||||||.|.||:.|||.|:|.|||||:.|||...||||||.
BPUM_1338___y      1 MRLLTLMEYCLLIFFMGIYLSATGFNARDFGLYIGLVLIYTLVHIFSKRF     50

BSNT_02405___     51 LEKRGKENKQVHLFFSVLAIIGSVFITVLCIALVASFSK--     89
                     |:||||||.:|.||.|||||.||||.:||.|.|:.:...  
BPUM_1338___y     51 LQKRGKENHKVGLFRSVLAITGSVFSSVLAIVLIVTVLTPN     91


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