Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02400 and BPUM_1334

See DNA alignment / Visit BSNT_02400 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_02400___fruR.1.24716.seq
#    -bsequence pep-align/BPUM_1334___fruR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02400___fruR-BPUM_1334___fruR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02400___fruR-BPUM_1334___fruR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02400___fruR
# 2: BPUM_1334___fruR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     182/251 (72.5%)
# Similarity:   220/251 (87.6%)
# Gaps:           0/251 ( 0.0%)
# Score: 952.0
# 
#
#=======================================

BSNT_02400___      1 MLTPERHQLIIDQIEKHDVVKIQELINLTNASESTIRRDLSTLEERGFLK     50
                     ||||||||||||.:|::||:|||:|..:|:|||||||||||.|||:||||
BPUM_1334___f      1 MLTPERHQLIIDCLEENDVIKIQDLTIMTDASESTIRRDLSALEEKGFLK     50

BSNT_02400___     51 RVHGGAAKLSDIRLEPDMLEKSSKNLHDKLKIAEKAAFLLEEGDCIYLDA    100
                     ||||||||:|.||||||:.|||:|||.:|..|||.||.||::||||||||
BPUM_1334___f     51 RVHGGAAKISSIRLEPDVFEKSAKNLQEKSLIAEAAAALLKQGDCIYLDA    100

BSNT_02400___    101 GTTTLHMIDFMDKTKDIVVVTNGVMHIDALIRKEISFYLLGGYVKHRTGA    150
                     ||||..||::||..:||||||||||||:||:||.|||||:||.|||||||
BPUM_1334___f    101 GTTTQQMIEYMDPDQDIVVVTNGVMHIEALMRKGISFYLIGGSVKHRTGA    150

BSNT_02400___    151 IIGGASLIAMDQYRFDKSFLGTNGVHTEAGFTTPDPDEALLKQKAIKQAK    200
                     ::|.|:|.||:.|||||||:||||:|.|||||||||:|||:|::|:||||
BPUM_1334___f    151 MVGAAALTAMEHYRFDKSFVGTNGIHPEAGFTTPDPEEALMKKRAMKQAK    200

BSNT_02400___    201 HAYVLADPSKFGEISFSAFAAIGDATIITTDAEELTFDNYQEKTVVKVVK    250
                     ..|:|.|.|||||||||.||::.:|||||.||:|.:||||.||||:||||
BPUM_1334___f    201 KTYILTDASKFGEISFSTFASLQEATIITNDAKEDSFDNYHEKTVIKVVK    250

BSNT_02400___    251 P    251
                     .
BPUM_1334___f    251 T    251


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