Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02399 and BPUM_1333
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_02399___yknZ.1.24716.seq
# -bsequence pep-align/BPUM_1333___yknZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02399___yknZ-BPUM_1333___yknZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02399___yknZ-BPUM_1333___yknZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02399___yknZ
# 2: BPUM_1333___yknZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 263/397 (66.2%)
# Similarity: 335/397 (84.4%)
# Gaps: 0/397 ( 0.0%)
# Score: 1402.0
#
#
#=======================================
BSNT_02399___ 1 MSLLENIRMALSSVLAHKMRSILTMLGIIIGVGSVIVVVAVGQGGEQMLK 50
|.|.|||::|::||||||:|||||||||||||||||.|||:|||||||||
BPUM_1333___y 1 MKLFENIKIAMNSVLAHKLRSILTMLGIIIGVGSVIAVVAIGQGGEQMLK 50
BSNT_02399___ 51 QSISGPGNTVELYYMPSDEELASNPNAAAESTFTENDIKGLKGIEGIKQV 100
.|||||.|||::.|.||||||.:||||..::||||.|||.:|.:.|:.||
BPUM_1333___y 51 GSISGPNNTVDMTYTPSDEELNANPNALFDATFTEEDIKSIKTMNGVNQV 100
BSNT_02399___ 101 VASTSESMKARYHEEETDATVNGINDGYMNVNSLEIESGRTFTDNDFLAG 150
.:||::.|:.|:.:...||||||||:||.||:||:|..|:...|.||.:|
BPUM_1333___y 101 ASSTAQGMQLRFQDTTVDATVNGINEGYTNVHSLQIAEGQNLKDIDFRSG 150
BSNT_02399___ 151 NRAGIISQKMAEELFDKTSPLGEVVWINGQPVEIIGVLKKETGLLSFGLS 200
.||.:||:.:.:|||:....|||::|:||||||:||||.|:.|:|||.::
BPUM_1333___y 151 RRAALISEGLQKELFNGKKALGEMIWMNGQPVEVIGVLAKQKGMLSFDMN 200
BSNT_02399___ 201 EMYVPFNMMKSSFGTSDFSNVSLQVESADDIKSAGKEAAQLVNDNHGTED 250
|:||||.|:.|:||.:::..:|:||..||.:|..||.||.|:|:||.|||
BPUM_1333___y 201 EVYVPFAMLTSTFGINEYDKLSIQVAHADQMKEVGKNAAALLNENHHTED 250
BSNT_02399___ 251 SYQVMNMEEIAAGIGKVTAIMTTIIGSIAGISLLVGGIGVMNIMLVSVTE 300
:|:::||||||.|||::|::||||||||||||||||||||||||||||||
BPUM_1333___y 251 AYEMINMEEIAEGIGQITSVMTTIIGSIAGISLLVGGIGVMNIMLVSVTE 300
BSNT_02399___ 301 RTREIGIRKSLGATRGQILTQFLIESVVLTLIGGLVGIGIGYGGAGLVSA 350
|||||||||::||||.|||.||||||||||:||||:||.:|.|||.|||.
BPUM_1333___y 301 RTREIGIRKAIGATRAQILVQFLIESVVLTMIGGLMGIALGIGGASLVSL 350
BSNT_02399___ 351 IAGWPSLISWQVVCGGVLFSMLIGVIFGMLPANKAAKLDPIEALRYE 397
|||||||:|||::|.|||||||||::||::||||||:||||::||||
BPUM_1333___y 351 IAGWPSLVSWQIICIGVLFSMLIGIVFGLIPANKAARLDPIDSLRYE 397
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