Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02397 and BPUM_1331

See DNA alignment / Visit BSNT_02397 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_02397___yknX.1.24716.seq
#    -bsequence pep-align/BPUM_1331___yknX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02397___yknX-BPUM_1331___yknX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02397___yknX-BPUM_1331___yknX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02397___yknX
# 2: BPUM_1331___yknX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity:     175/379 (46.2%)
# Similarity:   254/379 (67.0%)
# Gaps:          13/379 ( 3.4%)
# Score: 889.0
# 
#
#=======================================

BSNT_02397___      1 -MKKVWIGIGIAVIVALFVGINIYRSAAPTSGSAGKEIQTGSVEENEISS     49
                      .||:.||....:::.||:|.||.::.:..:.:|.  |:|....:.||::
BPUM_1331___y      1 MRKKIIIGSIFIIVIGLFIGFNIAKNQSKPASTAA--IKTVKPMQKEITT     48

BSNT_02397___     50 TVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQL     99
                     .||.||||.||.||:::.|.|||.|:.|.||||:|||.||||:||.|.:|
BPUM_1331___y     49 KVMTPGTLSFSEEQFIYAEEDKGHLKGISVKEGEKVKPGTPLLTYENREL     98

BSNT_02397___    100 SLEKEQNQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAEKQIES    149
                     .||:||..|.:||:.|:.:|:|.:|..||.|:        :.|:....::
BPUM_1331___y     99 ELEEEQQALAAESSTLKREQLQNRLSELDKKQ--------EGESATNPKN    140

BSNT_02397___    150 ERTELQMQKKTAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQEA    199
                     ||.:|:::.|.||:|.||.|:.::.:..::.||.|.|:|:|||||:.||.
BPUM_1331___y    141 ERDQLELELKAAELEQKQAEISQEKVKAQIEDLTVHSKIDGTVISIEQEE    190

BSNT_02397___    200 ASKKSDIQEPVIHIGNPKDLVVSGKLSEYDTLKVKKGQKVTLTSDVIQGK    249
                     .:.|.:.::|:|||||.|.::|.|.:||||.:||||.|||.:|||||:||
BPUM_1331___y    191 GAGKPEERQPIIHIGNEKKMIVRGLISEYDAIKVKKKQKVKITSDVIRGK    240

BSNT_02397___    250 TWKGTVSAVGLVPDQQESAAAQGTEQAVQYPLQVKIKGNLPEGKPGFKFI    299
                     :|:|.|..||.||.|..|....| :|.||||::::|||..||.|||||.|
BPUM_1331___y    241 SWQGVVKKVGGVPAQAASETTAG-DQTVQYPVEIEIKGKKPEAKPGFKMI    289

BSNT_02397___    300 MNIETDKRKANTLPSKAVKKEDDQYYVYTVKDGKAKRVNVKIGEVTDDLT    349
                     |.||||||:|.|:|..|||||||..|||.||....|::.|::||.:....
BPUM_1331___y    290 MEIETDKRQALTIPESAVKKEDDGQYVYIVKKNVLKKIKVELGETSGKDL    339

BSNT_02397___    350 EIKEGLTQDDQVILNPSDQVTDGMEVKS-    377
                     |:.:|:..:||:|..|||.:.|||||.: 
BPUM_1331___y    340 EVTKGVVAEDQIISQPSDDMYDGMEVNAE    368


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