Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02397 and BPUM_1331
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_02397___yknX.1.24716.seq
# -bsequence pep-align/BPUM_1331___yknX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02397___yknX-BPUM_1331___yknX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02397___yknX-BPUM_1331___yknX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02397___yknX
# 2: BPUM_1331___yknX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 175/379 (46.2%)
# Similarity: 254/379 (67.0%)
# Gaps: 13/379 ( 3.4%)
# Score: 889.0
#
#
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BSNT_02397___ 1 -MKKVWIGIGIAVIVALFVGINIYRSAAPTSGSAGKEIQTGSVEENEISS 49
.||:.||....:::.||:|.||.::.:..:.:|. |:|....:.||::
BPUM_1331___y 1 MRKKIIIGSIFIIVIGLFIGFNIAKNQSKPASTAA--IKTVKPMQKEITT 48
BSNT_02397___ 50 TVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQL 99
.||.||||.||.||:::.|.|||.|:.|.||||:|||.||||:||.|.:|
BPUM_1331___y 49 KVMTPGTLSFSEEQFIYAEEDKGHLKGISVKEGEKVKPGTPLLTYENREL 98
BSNT_02397___ 100 SLEKEQNQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAEKQIES 149
.||:||..|.:||:.|:.:|:|.:|..||.|: :.|:....::
BPUM_1331___y 99 ELEEEQQALAAESSTLKREQLQNRLSELDKKQ--------EGESATNPKN 140
BSNT_02397___ 150 ERTELQMQKKTAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQEA 199
||.:|:::.|.||:|.||.|:.::.:..::.||.|.|:|:|||||:.||.
BPUM_1331___y 141 ERDQLELELKAAELEQKQAEISQEKVKAQIEDLTVHSKIDGTVISIEQEE 190
BSNT_02397___ 200 ASKKSDIQEPVIHIGNPKDLVVSGKLSEYDTLKVKKGQKVTLTSDVIQGK 249
.:.|.:.::|:|||||.|.::|.|.:||||.:||||.|||.:|||||:||
BPUM_1331___y 191 GAGKPEERQPIIHIGNEKKMIVRGLISEYDAIKVKKKQKVKITSDVIRGK 240
BSNT_02397___ 250 TWKGTVSAVGLVPDQQESAAAQGTEQAVQYPLQVKIKGNLPEGKPGFKFI 299
:|:|.|..||.||.|..|....| :|.||||::::|||..||.|||||.|
BPUM_1331___y 241 SWQGVVKKVGGVPAQAASETTAG-DQTVQYPVEIEIKGKKPEAKPGFKMI 289
BSNT_02397___ 300 MNIETDKRKANTLPSKAVKKEDDQYYVYTVKDGKAKRVNVKIGEVTDDLT 349
|.||||||:|.|:|..|||||||..|||.||....|::.|::||.:....
BPUM_1331___y 290 MEIETDKRQALTIPESAVKKEDDGQYVYIVKKNVLKKIKVELGETSGKDL 339
BSNT_02397___ 350 EIKEGLTQDDQVILNPSDQVTDGMEVKS- 377
|:.:|:..:||:|..|||.:.|||||.:
BPUM_1331___y 340 EVTKGVVAEDQIISQPSDDMYDGMEVNAE 368
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