Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02396 and BPUM_1330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_02396___yknW.1.24716.seq
# -bsequence pep-align/BPUM_1330___yknW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02396___yknW-BPUM_1330___yknW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02396___yknW-BPUM_1330___yknW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02396___yknW
# 2: BPUM_1330___yknW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity: 67/244 (27.5%)
# Similarity: 112/244 (45.9%)
# Gaps: 49/244 (20.1%)
# Score: 214.5
#
#
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BSNT_02396___ 1 METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIII 50
|:.|| :||::.||.|.||...:|:.|.|.||.||..|..:.:
BPUM_1330___y 1 MKENV--------QKPTIIGVSTRPSEHLKRVWENPVVWWPLTCVLLLTV 42
BSNT_02396___ 51 VGAVLQSLGTDYSELLKSQDTQGLSAE---QMETVATITKFGGMAGAIIG 97
:...| |||: .:|:.|: .:..|..:| :||
BPUM_1330___y 43 IVTYL-------SELV----NEGMWADLSLPVSVVYVVT--------LIG 73
BSNT_02396___ 98 GIAALFIAPLIYWLCVKISGGVTTYKKMLSLGLFVSLISSLGLLVN--GI 145
.:..|.:...||.|.|.::.|..:::::.|..||::.::.:|.::: .|
BPUM_1330___y 74 LLLGLVVNAAIYKLIVFLAKGDASFQQLFSAVLFITPVTIVGTIISHLSI 123
BSNT_02396___ 146 VAFTTDVNPLYSTTSLAGIIPSDGALASVLNTFEIFSIWSFVLLAIGLHK 195
:.|....|. :.|||..:|.:.|...:||...::|.||:.||
BPUM_1330___y 124 ILFHVPKNT--TITSLNALIQTSGPWHAVLANIDLFVIWNLVL------- 164
BSNT_02396___ 196 TGGISKKAGWISAIILFGILVVFSLFSGLINSVAGA-------- 231
||.:..|.|.||..|.:.|:.||.|.|.:...|..|
BPUM_1330___y 165 TGFLLMKVGHISPRITWTIIGVFYLLSIIFQYVGTAITISVSWG 208
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