Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02380 and BPUM_1322
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence pep-align/BSNT_02380___yknT.1.24716.seq
# -bsequence pep-align/BPUM_1322___yknT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02380___yknT-BPUM_1322___yknT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02380___yknT-BPUM_1322___yknT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02380___yknT
# 2: BPUM_1322___yknT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity: 111/326 (34.0%)
# Similarity: 188/326 (57.7%)
# Gaps: 26/326 ( 8.0%)
# Score: 519.0
#
#
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BSNT_02380___ 1 MKR--SGPFFHDVSQENLYLKSELSRCHKLIAELEASYFHQKNNKLLKEN 48
|.| :.|.|||:||||||||:|.::..::|::|::||.:.||.||.:|.
BPUM_1322___y 1 MNRRPASPLFHDLSQENLYLKAEAAKYQQMISDLQSSYTYSKNKKLTQEY 50
BSNT_02380___ 49 TDMKEKLQQLSAELTHMSTKEKHASHTSQTLHQIRAELLDKIVVLQELLS 98
.:||:...||..:|..|:..:.|.:...|.|...::|||.|||:|.|:|.
BPUM_1322___y 51 HEMKKDYTQLKQQLDEMTIDQDHTASKIQDLSYSKSELLHKIVLLHEMLQ 100
BSNT_02380___ 99 AETFKRRAEIEEKHKLHIAKVKIEEENKNLHKRISELQASIEQEQNALLQ 148
.|||.||.|.||||:||:..:|.:|.::.|::| ::.:...|.:
BPUM_1322___y 101 KETFHRRKETEEKHRLHLKVIKYKEISQQLNER-------MQDQDKRLAK 143
BSNT_02380___ 149 AKQQAELIKAENGRLKKQMVEKEYQLKHIKIEVDHMKDRIIETKERLLDI 198
.:::...:.|...:|::.:.:|..:|..::..|.|:::|..||:|:||.|
BPUM_1322___y 144 EEKKGNTLSAVIEKLQQTLSDKNAELHLLQEGVKHLQERFYETQEKLLQI 193
BSNT_02380___ 199 EKTKEKLFHETIISYKRQLDESDAWIASHFADIDGGTKQKEKTEEE---A 245
||.||.:|:||:|||::||.||:.|||||||||| |..:|..: .
BPUM_1322___y 194 EKAKEAIFYETLISYQKQLAESEEWIASHFADID----QSAQTNSQPFSR 239
BSNT_02380___ 246 PAVYAQPNHVETILEDVTKQIHVLQKQLARAQSSDQAKSHTIEELKNRAA 295
..:......:|.||:.:.:|:..||.|:...|.:.:..:..|:..|.:..
BPUM_1322___y 240 ETLLQTTEEIEPILKKLNEQVQTLQAQVDAVQQNGEIMTVKIDGFKKQRD 289
BSNT_02380___ 296 EEKPYQKWVYKLNLEKENKPSQKKPQ 321
.....::.||.::.:|
BPUM_1322___y 290 HLPKERRIVYTVDQKK---------- 305
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