Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02376 and BPUM_1321
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence pep-align/BSNT_02376___rok.1.24716.seq
# -bsequence pep-align/BPUM_1321___rok.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02376___rok-BPUM_1321___rok.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02376___rok-BPUM_1321___rok.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02376___rok
# 2: BPUM_1321___rok
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 157/201 (78.1%)
# Similarity: 170/201 (84.6%)
# Gaps: 18/201 ( 9.0%)
# Score: 752.0
#
#
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BSNT_02376___ 1 MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGS--PSE 48
|||||||||||||||||||||||||||||||.||||||||||.|: .|:
BPUM_1321___r 1 MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSD 50
BSNT_02376___ 49 IKKDFRSEKKPDSLPVLAELAAQEIRSYQPQSQQQSVQPQLQSISSL--- 95
.||:.|:|:|.|||||||||||||:|||||.:|.|| .|.|||
BPUM_1321___r 51 TKKEVRTERKTDSLPVLAELAAQEMRSYQPPAQSQS-----NSASSLGTG 95
BSNT_02376___ 96 -----PAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSEL 140
|.|||:|:|||||||||||||||||||||||||||||||||||||
BPUM_1321___r 96 QLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSEL 145
BSNT_02376___ 141 QKEIEKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILEGEIESAESAN 190
|||||||||||||||||||||||||||||||||||||||||:|::.:.
BPUM_1321___r 146 QKEIEKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE-- 193
BSNT_02376___ 191 E 191
BPUM_1321___r 193 - 193
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