Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02374 and BPUM_1320

See DNA alignment / Visit BSNT_02374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence pep-align/BSNT_02374___ykuV.1.24716.seq
#    -bsequence pep-align/BPUM_1320___ykuV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02374___ykuV-BPUM_1320___ykuV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02374___ykuV-BPUM_1320___ykuV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02374___ykuV
# 2: BPUM_1320___ykuV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     129/152 (84.9%)
# Similarity:   140/152 (92.1%)
# Gaps:           4/152 ( 2.6%)
# Score: 706.0
# 
#
#=======================================

BSNT_02374___      1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQ     50
                     ||||||||||||.|.|||||||:|.|||||||||||||:|||||||||||
BPUM_1320___y      1 MKLRQPMPELTGAKEWLNGEVTKEDLIGEKPTLIHFWSVSCHLCKEAMPQ     50

BSNT_02374___     51 VNEFRDKYQDQLNVVAVHMPRSEDDLDLGKIKETAAEHDITQPIFVDSDH    100
                     ||:|||:|:|||||:|||||||||||||.||||.|.||:|||||||||||
BPUM_1320___y     51 VNQFRDEYKDQLNVIAVHMPRSEDDLDLDKIKEVANEHEITQPIFVDSDH    100

BSNT_02374___    101 ALTDSFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE--    148
                     .||::||||||||||||||||.||||||||||||||||||||||:|:|  
BPUM_1320___y    101 KLTEAFENEYVPAYYVFDKTGALRHFQAGGSGMKMLEKRVNRVLSESEKA    150

BSNT_02374___    148 --    148
                       
BPUM_1320___y    151 AE    152


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