Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02370 and BPUM_1318

See DNA alignment / Visit BSNT_02370 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence pep-align/BSNT_02370___ykuT.1.24716.seq
#    -bsequence pep-align/BPUM_1318___ykuT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02370___ykuT-BPUM_1318___ykuT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02370___ykuT-BPUM_1318___ykuT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02370___ykuT
# 2: BPUM_1318___ykuT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     169/271 (62.4%)
# Similarity:   216/271 (79.7%)
# Gaps:           6/271 ( 2.2%)
# Score: 905.5
# 
#
#=======================================

BSNT_02370___      1 MDFIKQYDWAGLITNAGVLLIKLAIMILLYFIVRSLGMKIIKHLFAKFEE     50
                     |...:|.||..:|.|:.::|:||..:..:|||::::|.|:||..::.|.|
BPUM_1318___y      1 MKAFEQVDWISIILNSSMILLKLIAIFAIYFIIKAIGNKMIKRAYSTFSE     50

BSNT_02370___     51 QNSLSIGRAHTLRSLTLNIFAYTLIFIFFVMVLDLFHYDPSALLAGAGIV    100
                     ::.:|:.||.||:|||||||||.||||..||:||||||:|:|||||||:|
BPUM_1318___y     51 KHDVSLSRAQTLQSLTLNIFAYILIFILVVMILDLFHYNPTALLAGAGVV    100

BSNT_02370___    101 GLAVGFGAQGLVSDIVTGFFILLEKQLDVGDYITVSTFDGIVEQVGLRTT    150
                     |||:||||||||||||||||||||||.|||:||||:.|||||||:|||||
BPUM_1318___y    101 GLAIGFGAQGLVSDIVTGFFILLEKQFDVGEYITVAGFDGIVEQIGLRTT    150

BSNT_02370___    151 QIRSFDGTLHYIPNRNITNVSNHSRGTMQALVDIKVPAERNIDEMIHILQ    200
                     |:||||||||:||||:|.||||||||||||||||::..|.|:|:||..||
BPUM_1318___y    151 QLRSFDGTLHFIPNRSILNVSNHSRGTMQALVDIELSPEENVDQMITALQ    200

BSNT_02370___    201 QVCDETAAALPQIKEGPNVIGIQELGTSEIVIRVIAKTENMEQWRVERVL    250
                     ..|||....:|||.|||.|:|::..|:|.:|:|:|||||.||||||||:|
BPUM_1318___y    201 AACDEVREDIPQIIEGPQVVGVEAFGSSSLVLRIIAKTETMEQWRVERIL    250

BSNT_02370___    251 RKEIKNAFDRAFPKETE----    267
                     ||::|...|  ..||.:    
BPUM_1318___y    251 RKKMKEVLD--IEKEQKEPGQ    269


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