Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02367 and BPUM_1316
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence pep-align/BSNT_02367___ykuR.1.24716.seq
# -bsequence pep-align/BPUM_1316___ykuR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02367___ykuR-BPUM_1316___ykuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02367___ykuR-BPUM_1316___ykuR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02367___ykuR
# 2: BPUM_1316___ykuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 286/376 (76.1%)
# Similarity: 322/376 (85.6%)
# Gaps: 2/376 ( 0.5%)
# Score: 1517.0
#
#
#=======================================
BSNT_02367___ 1 -MKKEELIAIRRDLHRIPELGFQEFKTQQYLLHVLEQYPQDRIEIEKWRT 49
:.:|:||:||||||:||||||:|||||.||::.|:.|.:||||:|.|||
BPUM_1316___y 1 MLNREQLISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRT 50
BSNT_02367___ 50 GLFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLH 99
||||||.||.||::.|||||:|.|||.|.||.||.|.|.|.|||||||||
BPUM_1316___y 51 GLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLH 100
BSNT_02367___ 100 MTIALGIIDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWQPDF 149
||||||:||||||.|:|.||||:|||||||||||||||.|||||||.|||
BPUM_1316___y 101 MTIALGVIDHFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDF 150
BSNT_02367___ 150 ITALHIAPELPVGTIATKSGLLFANTSELVIDLEGKGGHAAYPHLAEDMV 199
|||||||||.||||||||.|||||||||||||||||||||||||||.|||
BPUM_1316___y 151 ITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMV 200
BSNT_02367___ 200 VAASTLVTQLQTIISRNTDPLDSAVITVGTITGGSAQNIIAETAHLEGTI 249
||||.||.|||::||||.|||||||||:||||||:||||||:.|.|:|||
BPUM_1316___y 201 VAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNIIAQHAKLDGTI 250
BSNT_02367___ 250 RTLSEESMKQVKERIEDVVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEE 299
||||.|||::|::|||.:.||||||:.||..|.|||.|::|.|:..||||
BPUM_1316___y 251 RTLSPESMEKVRKRIEALAKGIEIGYECKATVRYPSSYYEVDNSKELTEE 300
BSNT_02367___ 300 FMSFVAEHQLATVIEAKEAMTGEDFGYMLKKYPGFMFWLGADSEHGLHHA 349
|||:|||..||.|:|.:|||||||||||||||||||||||.|||:|||||
BPUM_1316___y 301 FMSYVAEEGLANVVECREAMTGEDFGYMLKKYPGFMFWLGVDSEYGLHHA 350
BSNT_02367___ 350 KLNPDENAIETAVNVMTGYFSVYAN- 374
||.|||.||||||||||.||...|.
BPUM_1316___y 351 KLMPDEKAIETAVNVMTAYFKKQAGE 376
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