Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02367 and BPUM_1316

See DNA alignment / Visit BSNT_02367 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence pep-align/BSNT_02367___ykuR.1.24716.seq
#    -bsequence pep-align/BPUM_1316___ykuR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02367___ykuR-BPUM_1316___ykuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02367___ykuR-BPUM_1316___ykuR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02367___ykuR
# 2: BPUM_1316___ykuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity:     286/376 (76.1%)
# Similarity:   322/376 (85.6%)
# Gaps:           2/376 ( 0.5%)
# Score: 1517.0
# 
#
#=======================================

BSNT_02367___      1 -MKKEELIAIRRDLHRIPELGFQEFKTQQYLLHVLEQYPQDRIEIEKWRT     49
                      :.:|:||:||||||:||||||:|||||.||::.|:.|.:||||:|.|||
BPUM_1316___y      1 MLNREQLISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRT     50

BSNT_02367___     50 GLFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLH     99
                     ||||||.||.||::.|||||:|.|||.|.||.||.|.|.|.|||||||||
BPUM_1316___y     51 GLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLH    100

BSNT_02367___    100 MTIALGIIDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWQPDF    149
                     ||||||:||||||.|:|.||||:|||||||||||||||.|||||||.|||
BPUM_1316___y    101 MTIALGVIDHFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDF    150

BSNT_02367___    150 ITALHIAPELPVGTIATKSGLLFANTSELVIDLEGKGGHAAYPHLAEDMV    199
                     |||||||||.||||||||.|||||||||||||||||||||||||||.|||
BPUM_1316___y    151 ITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMV    200

BSNT_02367___    200 VAASTLVTQLQTIISRNTDPLDSAVITVGTITGGSAQNIIAETAHLEGTI    249
                     ||||.||.|||::||||.|||||||||:||||||:||||||:.|.|:|||
BPUM_1316___y    201 VAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNIIAQHAKLDGTI    250

BSNT_02367___    250 RTLSEESMKQVKERIEDVVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEE    299
                     ||||.|||::|::|||.:.||||||:.||..|.|||.|::|.|:..||||
BPUM_1316___y    251 RTLSPESMEKVRKRIEALAKGIEIGYECKATVRYPSSYYEVDNSKELTEE    300

BSNT_02367___    300 FMSFVAEHQLATVIEAKEAMTGEDFGYMLKKYPGFMFWLGADSEHGLHHA    349
                     |||:|||..||.|:|.:|||||||||||||||||||||||.|||:|||||
BPUM_1316___y    301 FMSYVAEEGLANVVECREAMTGEDFGYMLKKYPGFMFWLGVDSEYGLHHA    350

BSNT_02367___    350 KLNPDENAIETAVNVMTGYFSVYAN-    374
                     ||.|||.||||||||||.||...|. 
BPUM_1316___y    351 KLMPDEKAIETAVNVMTAYFKKQAGE    376


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