Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02365 and BPUM_1315

See DNA alignment / Visit BSNT_02365 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02365___ykuQ.1.24716.seq
#    -bsequence pep-align/BPUM_1315___dapD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: BPUM_1315___dapD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     220/236 (93.2%)
# Similarity:   227/236 (96.2%)
# Gaps:           0/236 ( 0.0%)
# Score: 1110.0
# 
#
#=======================================

BSNT_02365___      1 MKMMDANEIISFIQNSTKSTPVKVYVKGELEGINFGESAKAFINGNTGVV     50
                     ||.||||||||||||||||||||||:||:||||.|||.||.||.||||||
BPUM_1315___d      1 MKQMDANEIISFIQNSTKSTPVKVYIKGDLEGIEFGEQAKTFITGNTGVV     50

BSNT_02365___     51 FGEWSEIQTAIEENQSKIEDYVVENDRRNSAIPMLDLKNIKARIEPGAII    100
                     |||||:||.|:|.|:.||||.|||||||||||||||||||||||||||||
BPUM_1315___d     51 FGEWSDIQEALETNKDKIEDVVVENDRRNSAIPMLDLKNIKARIEPGAII    100

BSNT_02365___    101 RDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1315___d    101 RDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGA    150

BSNT_02365___    151 GSVLAGVIEPPSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVVN    200
                     |||||||||||||||||:|||||||||||||||||:||||||||||||||
BPUM_1315___d    151 GSVLAGVIEPPSAKPVVVEDDVVIGANAVVLEGVTIGKGAVVAAGAIVVN    200

BSNT_02365___    201 DVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL    236
                     ||||||||||||||||||||||||||||||||||||
BPUM_1315___d    201 DVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL    236


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.