Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02365 and BPUM_1315
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_02365___ykuQ.1.24716.seq
# -bsequence dna-align/BPUM_1315___dapD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: BPUM_1315___dapD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 715
# Identity: 584/715 (81.7%)
# Similarity: 584/715 (81.7%)
# Gaps: 8/715 ( 1.1%)
# Score: 2376.5
#
#
#=======================================
BSNT_02365___ 1 ATGAAAATGATGGACGCAAATGAAATTATTTCATTTATTCAAAATAGTAC 50
||||||...||||||||.||||||||||||||||||||||||||||||||
BPUM_1315___d 1 ATGAAACAAATGGACGCTAATGAAATTATTTCATTTATTCAAAATAGTAC 50
BSNT_02365___ 51 AAAATCAACACCTGTAAAGGTTTACGTGAAAGGTGAGCTGGAAGGAATCA 100
|||||||||||||||.||.||.|||.|.||||||||..|.|||||.||..
BPUM_1315___d 51 AAAATCAACACCTGTCAAAGTCTACATTAAAGGTGATTTAGAAGGTATTG 100
BSNT_02365___ 101 ATTTCGGCGAATCTGCGAAAGCTTTTATCAACGGAAACACTGGTGTCGTT 150
|.||.||.|||...||.|||.|.||.||||..|||||||||||.||.|||
BPUM_1315___d 101 AGTTTGGTGAACAGGCAAAAACGTTCATCACAGGAAACACTGGAGTTGTT 150
BSNT_02365___ 151 TTCGGTGAGTGGAGCGAAATCCAAACAGCAATCGAAGAAA--ACCAAAG- 197
|||||||||||||||||.||.|||..|||..| ||||| |.|||||
BPUM_1315___d 151 TTCGGTGAGTGGAGCGACATTCAAGAAGCGCT---AGAAACGAACAAAGA 197
BSNT_02365___ 198 CAAAATCGAAGACTATGTGGTTGAAAATGACCGCCGCAATTCTGCGATCC 247
||||||.|||||...|||.||.||||||||.||||||||.|||||.||||
BPUM_1315___d 198 CAAAATTGAAGATGTTGTTGTGGAAAATGATCGCCGCAACTCTGCCATCC 247
BSNT_02365___ 248 CAATGCTTGATCTTAAA-AACATCAAAGCGCGTATCGAGCCGGGCGCGAT 296
|||||.|.||| ||||| |||||.|||||.|||||.|||||.||.|||||
BPUM_1315___d 248 CAATGTTAGAT-TTAAAGAACATTAAAGCACGTATTGAGCCAGGTGCGAT 296
BSNT_02365___ 297 CATCCGCGACCAAGTTGAAATCGGTGATAACGCAGTCATCATGATGGGTG 346
|||.||.|||||||||||||||||||||||.|||||||||||||||||.|
BPUM_1315___d 297 CATTCGTGACCAAGTTGAAATCGGTGATAATGCAGTCATCATGATGGGGG 346
BSNT_02365___ 347 CTTCTATTAATATCGGTTCAGTCATCGGCGAAGGCACAATGATTGATATG 396
|||||||||||||||||||.||.|||||||||||.|||||||||||.|||
BPUM_1315___d 347 CTTCTATTAATATCGGTTCTGTGATCGGCGAAGGTACAATGATTGACATG 396
BSNT_02365___ 397 AACGTTGTGCTTGGCGGACGAGCTACTGTTGGAAAAAACTGCCATATCGG 446
|||||.|||||||||||.||.||.||.||.||.||.|||||.||||||||
BPUM_1315___d 397 AACGTAGTGCTTGGCGGCCGTGCGACAGTAGGTAAGAACTGTCATATCGG 446
BSNT_02365___ 447 CGCGGGTTCTGTACTTGCGGGCGTTATTGAGCCGCCATCCGCTAAACCGG 496
.||.||.|||||.|||||.||.||.||||||||.||.||.|||||.||.|
BPUM_1315___d 447 TGCTGGATCTGTTCTTGCAGGTGTCATTGAGCCACCGTCTGCTAAGCCAG 496
BSNT_02365___ 497 TTGTGATTGAAGACGACGTCGTAATCGGCGCAAATGCTGTTGTGCTTGAA 546
||||..|.|||||.||.||.||.|||||.||.|||||||||||.||.|||
BPUM_1315___d 497 TTGTCGTAGAAGATGATGTTGTCATCGGTGCGAATGCTGTTGTTCTAGAA 546
BSNT_02365___ 547 GGCGTAACAGTAGGTAAAGGAGCTGTTGTTGCTGCGGGCGCGATCGTGGT 596
||.||.|||.|.||||||||.||.||.||.|||||.||.||||||||.||
BPUM_1315___d 547 GGTGTGACAATTGGTAAAGGTGCAGTCGTAGCTGCAGGTGCGATCGTTGT 596
BSNT_02365___ 597 AAACGACGTTGAGCCATACACTGTCGTTGCAGGCACACCAGCTAAAAAAA 646
.|||||.||.|||||.|||||.||.||.|||||.|||||.||.||.||||
BPUM_1315___d 597 GAACGATGTAGAGCCTTACACAGTTGTAGCAGGTACACCTGCAAAGAAAA 646
BSNT_02365___ 647 TCAAAGACATTGATGAAAAAACAAAAGGCAAAACTGAAATCAAGCAGGAA 696
||||||||||||||||||||||||||||.|||||.|||||.||.||.|||
BPUM_1315___d 647 TCAAAGACATTGATGAAAAAACAAAAGGTAAAACAGAAATTAAACAAGAA 696
BSNT_02365___ 697 TTACGCCAGCTGTAA 711
.|.||.|||||.|||
BPUM_1315___d 697 CTGCGTCAGCTTTAA 711
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