Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02363 and BPUM_1313

See DNA alignment / Visit BSNT_02363 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02363___ykuO.1.24716.seq
#    -bsequence pep-align/BPUM_1313.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02363___ykuO-BPUM_1313.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02363___ykuO-BPUM_1313.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02363___ykuO
# 2: BPUM_1313
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     199/297 (67.0%)
# Similarity:   240/297 (80.8%)
# Gaps:           0/297 ( 0.0%)
# Score: 1091.0
# 
#
#=======================================

BSNT_02363___      1 MFHKGATAVTASAFSGYFVAVQREGIFHYSLEQGWRKLFRLKSKIHCISY     50
                     |||||||||.||...||||||:||||||||:|.||::||:||.|||.|||
BPUM_1313          1 MFHKGATAVAASKSGGYFVAVKREGIFHYSVESGWQQLFKLKHKIHAISY     50

BSNT_02363___     51 IGPYLFGVGEKGTVIRSADEGKTWTMSSFPTNATVWAIIGRNNGFVCAHG    100
                     ||||||||||.||||||.|||.||.:|||||||.||:|.||.:|||||||
BPUM_1313         51 IGPYLFGVGENGTVIRSGDEGHTWALSSFPTNAVVWSITGRKDGFVCAHG    100

BSNT_02363___    101 KHCIYVSDDFGVSWRVAKPFAEFHNPPVIRSLCLHGGNLFIGTQIHEYFG    150
                     ||.||||:|||:||.:.||||..::||||||||..|.:|:|||||||..|
BPUM_1313        101 KHSIYVSNDFGISWEIMKPFAHVNHPPVIRSLCAAGDHLYIGTQIHEVHG    150

BSNT_02363___    151 GIWAYDIKRDTVQVVKKEKNRMTASMLVFNENWLVAAMGSVKGKHGAVTV    200
                     |||.||::.:.|.::.:||:|||||||:..|:.||.|:||.|||.|:|.:
BPUM_1313        151 GIWVYDLESEQVFLLNREKHRMTASMLLCQEHLLVCALGSKKGKKGSVQI    200

BSNT_02363___    201 RNLLNGEEFIIQSSMIRIEESFLDLSEDDGIIYVTTTQDENGFSRIYQAD    250
                     .:|.......|||.....||||||:|||:.|:||||:|||:|||::||.|
BPUM_1313        201 LDLHTNILHDIQSQAFAREESFLDVSEDNSIVYVTTSQDEHGFSKVYQLD    250

BSNT_02363___    251 LEARSLKWFDTIKGHGWRVANQKENFFCAGLYECKFVQPYEVSAMIH    297
                     :|.:.|||||||||||:|||||.||||||||||.|||:||:..|:||
BPUM_1313        251 IEQKELKWFDTIKGHGFRVANQNENFFCAGLYESKFVRPYDEPALIH    297


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