Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02361 and BPUM_1310

See DNA alignment / Visit BSNT_02361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02361___ccpC.1.24716.seq
#    -bsequence pep-align/BPUM_1310___ccpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02361___ccpC-BPUM_1310___ccpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02361___ccpC-BPUM_1310___ccpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02361___ccpC
# 2: BPUM_1310___ccpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     237/294 (80.6%)
# Similarity:   265/294 (90.1%)
# Gaps:           2/294 ( 0.7%)
# Score: 1256.0
# 
#
#=======================================

BSNT_02361___      1 MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKAWGKKIFLR     50
                     ||||||||||||:||||||||:|||||||||||||||||||.||.|||.|
BPUM_1310___c      1 MQLQELHMLVVLSEELNMRKASERLFVSQPALSQRLQTIEKEWGTKIFFR     50

BSNT_02361___     51 SQKGLTVTPAGEKIIQFANDVTLEQERIRENIDELEGEIHGTLKLAVASI    100
                     ||||||||.|||:|||||.:||:||:|:||.|||||||||||||||||||
BPUM_1310___c     51 SQKGLTVTSAGEQIIQFAKEVTVEQDRVRERIDELEGEIHGTLKLAVASI    100

BSNT_02361___    101 IGQHWLPKVLKTYVEKYPNAKISLITGWSSEMLKSLYEDQVHIGIIRGNP    150
                     |||||||||||.|||||||||:||:||||||||||||||.||||||||||
BPUM_1310___c    101 IGQHWLPKVLKRYVEKYPNAKVSLVTGWSSEMLKSLYEDHVHIGIIRGNP    150

BSNT_02361___    151 EWKGRKDYLMTDHLYLVDTEISCIEDIAHTERPFIQFKSDSTYFQEIQHW    200
                     :|||.|:|||||||||||:.|..::::..||||||||||||||:||||||
BPUM_1310___c    151 DWKGTKEYLMTDHLYLVDSVIKDVDELIETERPFIQFKSDSTYYQEIQHW    200

BSNT_02361___    201 WHQKFKTSPKQTILVDQIETCKQMALHGIGYAILPSVTLQNEDK-VNKMP    249
                     ||||||.||||||||||||||||||.|||||||||||||.:.:| |:|.|
BPUM_1310___c    201 WHQKFKVSPKQTILVDQIETCKQMAYHGIGYAILPSVTLYDHEKSVHKTP    250

BSNT_02361___    250 LLDMKGHPIGRDTWLLGYEPAFELKQVQAFVQVIKDMLDQENPF    293
                     |:|:.|..|||||||||||.:|:||||||||.|:|:||:.:.. 
BPUM_1310___c    251 LVDVNGEQIGRDTWLLGYEASFQLKQVQAFVGVVKEMLESDAV-    293


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